Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq9 89.7 1e-12
seq20 87.8 3e-12
>seq9
Length=63840602
Score = 89.7 bits (98), Expect = 1e-12
Identities = 98/128 (77%), Gaps = 2/128 (2%)
Strand=Plus/Plus
Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939
|| ||||||||||||||||||| || ||||| || ||| || || ||||| || || |
Sbjct 25234426 GGGTGGTAGCCTTTGCTGCTGTAGAAGGCATTTTCTTCTCTGGATCATTTGCTGCTATAT 25234485
Query 25940 TCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998
| ||||| ||| | ||| || | |||||| || || |||||||| || |||||||||
Sbjct 25234486 TTTGGCTGAAG-AAAAGAGGTCTCATGCCTGGACTCACTTTTTCCAATGAACTCATCAGC 25234544
Query 25999 AGGGACGA 26006
|| || ||
Sbjct 25234545 AGAGATGA 25234552
>seq20
Length=39541208
Score = 87.8 bits (96), Expect = 3e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| |||||| |||| ||||| || || ||||| || ||||| ||| ||||| ||||||
Sbjct 37615307 GGAGAGCGGGTGGTGGCCTTCGCGGCAGTGGAAGGAATCTTCTTCTCTGGTTCTTTTGCG 37615248
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
|||| |||||||||||| | ||| ||||| || || |||||||| || ||
Sbjct 37615247 TCCATTTTCTGGCTCAAGAAACGCGGGTTGATGCCTGGCCTCACATTTTCCAATGAACTT 37615188
Query 25993 ATCAGCAGGGACGAGG 26008
|| ||||| || ||||
Sbjct 37615187 ATTAGCAGAGATGAGG 37615172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928821114457600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |