Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq17 104 7e-17 >seq17 Length=44067645 Score = 104 bits (114), Expect = 7e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || |||||||| ||||| || || ||||||| ||||||||||| Sbjct 29141768 ACCAGTCTCAGCAGTCTTGACAGCTGTGTCAATGAGCCCCTCACGACCTCCCATAGCATG 29141827 Query 302667 GAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCG 302725 ||| || | ||| || ||| || || | | ||||| |||| || |||||||| Sbjct 29141828 GAAAAAGAACTCAGTGGG-CGTGAGGCCAGCCAGGTAGGAGTTCTCCACAAAACCACGGC 29141886 Query 302726 CCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATG 302785 ||| ||| || ||| ||| ||||||| |||||||||| || || | || ||| Sbjct 29141887 TCTCAGGCCCATAGTCATCCTTTATAAAGTGAGGCAGGGTCCGGTGCTTGAATCCAAATG 29141946 Query 302786 GGATACGCTTTCCATCAACGTTCTGCTGTCC 302816 | || || || || || ||||||||||| || Sbjct 29141947 GAATCCGTTTGCCCTCCACGTTCTGCTGCCC 29141977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471779130367480