Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq23 96.9 4e-15 >seq23 Length=36106517 Score = 96.9 bits (106), Expect = 4e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 172454 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTAC 172513 |||||| ||| ||||| ||| |||||||| || || ||||| || ||||| | Sbjct 32444823 AGGTGTGAAAATTTGGGATGCCAATGGTTCCCGAGACTTTTTGGACAGCCTGGGGTTCTC 32444764 Query 172514 TGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGC 172573 | ||| ||||||| ||||||||||| ||||||| ||||| ||| ||||| ||||| Sbjct 32444763 CAACAGAGAAGAAGGAGATTTAGGCCCTGTTTATGGCTTTCAGTGGCGACATTTTGGGGC 32444704 Query 172574 TCAATATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCA 172621 |||| | || ||| ||||||| |||| |||||||| || || Sbjct 32444703 AGAATACAAAGATAAAGATTCAGATTATTCAGGTCAAGGAGTAGATCA 32444656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632473471515200