Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq23 86.0 8e-12 >seq23 Length=36106517 Score = 86.0 bits (94), Expect = 8e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 168581 AGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTA-TGTGGTTTTA 168639 |||||| ||| ||||| | | |||||||| || || ||||| || || |||| | Sbjct 32444823 AGGTGTGAAAATTTGGGATGCCAATGGTTCCCGAGACTTTTTGGACAGCCTGGGGTTCT- 32444765 Query 168640 CCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAG 168699 || | ||| ||||||| |||||||| || ||||||| ||||| ||| ||||| || | Sbjct 32444764 CCAACAGAGAAGAAGGAGATTTAGGCCCTGTTTATGGCTTTCAGTGGCGACATTTTGGGG 32444705 Query 168700 CTCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCA 168748 | |||| | || ||| ||||||| | || ||||||||||| || Sbjct 32444704 CAGAATACAAAGATAAAGATTCAGATTATTCAGGTCAAGGAGTAGATCA 32444656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635161402971200