Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq23 86.0 8e-12
>seq23
Length=36106517
Score = 86.0 bits (94), Expect = 8e-12
Identities = 122/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 168581 AGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTA-TGTGGTTTTA 168639
|||||| ||| ||||| | | |||||||| || || ||||| || || |||| |
Sbjct 32444823 AGGTGTGAAAATTTGGGATGCCAATGGTTCCCGAGACTTTTTGGACAGCCTGGGGTTCT- 32444765
Query 168640 CCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAG 168699
|| | ||| ||||||| |||||||| || ||||||| ||||| ||| ||||| || |
Sbjct 32444764 CCAACAGAGAAGAAGGAGATTTAGGCCCTGTTTATGGCTTTCAGTGGCGACATTTTGGGG 32444705
Query 168700 CTCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCA 168748
| |||| | || ||| ||||||| | || ||||||||||| ||
Sbjct 32444704 CAGAATACAAAGATAAAGATTCAGATTATTCAGGTCAAGGAGTAGATCA 32444656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635161402971200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |