Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq20 89.7 5e-13 >seq20 Length=39541208 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| ||||| || | ||| || ||| | || |||| || |||| ||||| ||| Sbjct 37463347 TCCAGCATATGGGGCCCGACCTGTGACGGCCTCGACCGCATCGTCGAGCGCTGTGACCTG 37463406 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || ||| | || ||||| |||||| | | || ||||||||||| || |||| | ||| | Sbjct 37463407 CCCGAGATGCATGTGGGGGACTGGATGCTCTTCGAAAACATGGGGGCGTACACCGTGG-C 37463465 Query 21242 AGC-TCTTCAACCTTTAACGGCTTCC 21266 || | || ||||| |||||||||| Sbjct 37463466 TGCGGCCTCCACCTTCAACGGCTTCC 37463491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463533779587200