Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq20 89.7 5e-13
>seq20
Length=39541208
Score = 89.7 bits (98), Expect = 5e-13
Identities = 109/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181
|| ||||| ||||| || | ||| || ||| | || |||| || |||| ||||| |||
Sbjct 37463347 TCCAGCATATGGGGCCCGACCTGTGACGGCCTCGACCGCATCGTCGAGCGCTGTGACCTG 37463406
Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241
|| ||| | || ||||| |||||| | | || ||||||||||| || |||| | ||| |
Sbjct 37463407 CCCGAGATGCATGTGGGGGACTGGATGCTCTTCGAAAACATGGGGGCGTACACCGTGG-C 37463465
Query 21242 AGC-TCTTCAACCTTTAACGGCTTCC 21266
|| | || ||||| ||||||||||
Sbjct 37463466 TGCGGCCTCCACCTTCAACGGCTTCC 37463491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463533779587200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |