Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq31 89.7 1e-12
seq7 84.2 4e-11
>seq31
Length=25890693
Score = 89.7 bits (98), Expect = 1e-12
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682
||||| || || || ||||| | | ||| || ||||| |||||||||||||||||||||
Sbjct 2479961 TTCTGAATGTTGTAGTCAGACAAAGTTCGTCCATCTTCCAGTTGTTTTCCAGCAAAGATT 2479902
Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCT 82709
|||||||| ||||| ||||| || |||
Sbjct 2479901 AGTCTTTGCTGATCAGGAGGAATACCT 2479875
>seq7
Length=65339388
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/125 (76%), Gaps = 3/125 (2%)
Strand=Plus/Plus
Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTT 82670
||| | || || || || || || | ||||||| || || || | ||||||||||||
Sbjct 63136586 AGAATGGACTCCTTTTGAATGTTGCAGTCAGATAAAACTCATCCATTTTCTAGTTGTTTG 63136645
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT--ATCTTGAATCTTTG 82728
||||||||||| ||||||||||| || ||| ||| ||||||| ||| || || |||
Sbjct 63136646 CCAGCAAAGATCAGTCTTTGTTGCTCATGAGAAATTTCTTCCTTGGATCGTG-ATTTTTA 63136704
Query 82729 CTTTT 82733
|||||
Sbjct 63136705 CTTTT 63136709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981801537491560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |