Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq55 228 2e-54
seq25 199 1e-45
seq6 109 2e-18
seq31 107 6e-18
seq16 96.9 1e-14
seq7 96.9 1e-14
seq12 95.1 4e-14
seq26 91.5 4e-13
seq1 87.8 5e-12
>seq55
Length=1670966
Score = 228 bits (252), Expect = 2e-54
Identities = 875/1362 (64%), Gaps = 23/1362 (2%)
Strand=Plus/Minus
Query 349304 TACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCT 349363
||||| || || ||||| || ||||| |||| || || | || || || || | ||
Sbjct 1141825 TACGTGGCCTTCACCGACACGGAGCGGCTGATAGGCGACGCGGCCAAGAACCAGGTAGCC 1141766
Query 349364 GCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC 349423
||||| | || || || |||||||| || || || |||||||| | ||| |||
Sbjct 1141765 ATGAATCCCCAGAACACCGTCTTTGATGCCAAACGTCTCATTGGTAGGAAATTTAATGAT 1141706
Query 349424 AAATCTACA-CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGA 349482
| || ||||| ||| | || | || |||||| || || || || ||||
Sbjct 1141705 CC-TGTAGTGCAATCAGATATGAAGCTTTGGCCTTTTCAAGTGGTC---AATGAAGGTGG 1141650
Query 349483 TAAACC--AATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAA 349540
||||| || || || ||| || ||||| || ||||| || | || ||||||
Sbjct 1141649 GAAACCGAAAGTAATG--GTTTCCTACAAAGGGGAGAAAAAAGCCTTCTACCCTGAAGAA 1141592
Query 349541 ATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACA 349600
|| || || ||||| | ||| |||||||| | ||||| || | ||| || | |
Sbjct 1141591 ATCTCTTCTATGGTGCTTACTAAGATGAAGGAGACAGCTGAGGCTTTTTTGGGCCATCCT 1141532
Query 349601 GTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACA 349660
|| || ||||||| || ||||| ||||||||||||||||| | ||||| || ||
Sbjct 1141531 GTCACCAATGCTGTAATCACTGTGCCAGCCTATTTTAATGACTCTCAGCGCCAAGCCACC 1141472
Query 349661 AAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCT 349720
||||||||||| || || || | ||||| |||||||| || ||||||||||| ||
Sbjct 1141471 AAAGATGCTGGTGTGATCGCAGGTCTCAATGTGCTAAGAATTATCAATGAACCCACAGCG 1141412
Query 349721 GCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTT 349780
|| || || || ||||| | |||||| || | ||| | || | | || |||
Sbjct 1141411 GCTGCCATCGCCTATGGTTTAGATAAAGCAGGTCAGGGAGAGCGACATGTCTTAATCTTT 1141352
Query 349781 GATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAA 349840
||| | ||||| || || || |||||||| | || || | || || || ||||||||
Sbjct 1141351 GATCTGGGTGGAGGCACATTCGATGTATCCATTCTGACCATAGATGATGGCATTTTTGAG 1141292
Query 349841 GTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTT 349900
|| || || || || || || || || || || || || || || || || | || ||
Sbjct 1141291 GTAAAGGCCACAGCAGGGGACACGCACCTGGGCGGGGAGGACTTCGACAACAGGCTGGTG 1141232
Query 349901 TCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAG 349959
|| || || | || || ||| | |||| || | || || | | || |
Sbjct 1141231 AACCACTTCGTGGAGGAGTTCAAGAG-GAAGCACAAGAAGGACATCAGCCAGAACAAGCG 1141173
Query 349960 AGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTAC 350019
|| || | || || | || || || || | |||||||| || | || || | ||
Sbjct 1141172 CGCCGTGAGGCGGCTGCGCACGGCCTGCGAGAGGGCTAAGCGCACCCTGTCGTCCAGCAC 1141113
Query 350020 CCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTAC 350079
|| || | || ||||| || || || |||| || |||| | |||| || ||
Sbjct 1141112 GCAGGCCAACTTGGAGATTGACTCCCTGTTCGAGGGCATCGACTTCTATACATCCATCAC 1141053
Query 350080 ACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGA 350139
| || || |||||||| || ||| || || || | | || |||| ||||||||
Sbjct 1141052 CAGAGCCCGATTTGAAGAGTTGTGTGCAGACCTGTTCCGGGGCACCTTGGAGCCTGTGGA 1140993
Query 350140 AAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGG 350199
|| | | ||||| || ||| || | | || |||| | |||||||| ||
Sbjct 1140992 GAAGGCGCTTCGGGATGCCAAGATGGATAAGGCTAAAATCCATGACATTGTTTTAGTAGG 1140933
Query 350200 TGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA 350259
|| || || ||||| || || ||||| | | ||| || | |||||||| ||
Sbjct 1140932 GGGCTCCACCCGTATCCCTAAGGTTCAGAGGCTGCTACAGGACTACTTTAATGGACGTGA 1140873
Query 350260 ACCTTCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCA 350317
| || | | | || || || ||||| || || || ||||| ||||| || ||||||
Sbjct 1140872 TC--TCAACAAAAGTATCAACCCTGATGAGGCGGTGGCCTATGGGGCTGCAGTACAGGCA 1140815
Query 350318 TCTATTTT-ATCTGGAAATAAGAGTTCTAAAA---TTGATGATCTATTACTACTAGATGT 350373
| ||||| || || | || ||| ||| | | || || | ||||| |||||
Sbjct 1140814 GCCATTTTGATGGGGGACAAA----TCTGAAAAGGTACAAGACCTGCTGCTACTTGATGT 1140759
Query 350374 AACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAG 350433
|||| || || || || | || || | || | || |||||||| || || |
Sbjct 1140758 GGCTCCCCTGTCTCTAGGGCTGGAGACGGCCGGGGGCGTGATGACTGTCCTAATCAAGCG 1140699
Query 350434 AAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCC 350493
|| || | || || || || | || | || | || | |||| || |||||
Sbjct 1140698 CAACTCCACCATCCCCACCAAGCAGACACAGATCTTCACCACCTACTCAGACAACCAGCC 1140639
Query 350494 AGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACT 350553
| ||| || || |||| || ||||| | || || || || || ||
Sbjct 1140638 TGGGGTGCTGATCCAGGTATACGAGGGTGAGAGGGCCATGACCCGGGACAACAACCTGCT 1140579
Query 350554 TGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGT 350613
|| ||| ||||| || ||| || || || |||||||||||||||||||| ||
Sbjct 1140578 GGGGCGCTTTGACCTAACTGGAATCCCTCCTGCACCCAGAGGAGTTCCTCAGATTGAGGT 1140519
Query 350614 CTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGC 350655
| || || |||||| | ||||||||| | ||||| || ||
Sbjct 1140518 GACCTTTGACATTGATGCCAATGGTATTCTCAATGTAACAGC 1140477
>seq25
Length=34219090
Score = 199 bits (220), Expect = 1e-45
Identities = 369/534 (69%), Gaps = 8/534 (1%)
Strand=Plus/Plus
Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834
|| ||||| |||| ||||| ||||||||||| ||| | || || ||||||| || ||
Sbjct 16172794 ATCTTTGACCTAGGAGGTGGCACTTTTGATGTGTCAATCCTCACTATTGAAGATGGGATC 16172853
Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894
||||| || ||| | || ||||| || || || | ||||||||||| ||||| || ||
Sbjct 16172854 TTTGAGGTCAAATCTACAGCTGGAGACACCCACTTAGGTGGAGAAGACTTTGACAACCGA 16172913
Query 349895 CTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAA 349953
| || |||||| || || || |||||| |||| ||| | || || | || ||
Sbjct 16172914 ATGGTCAACCATTTTATTGCTGAGTTCAAGCGT-AAGCATAAGAAGGACATCAGTGAGAA 16172972
Query 349954 TCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATC 350013
|| || | |||||||| | ||||| ||||| |||||||||||| | | || ||
Sbjct 16172973 CAAGAGGGCTGTCCGTCGCCTCCGTACTGCTTGTGAGCGTGCTAAGCGTACGCTCTCTTC 16173032
Query 350014 TACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATC 350073
| ||||| || ||||||||||||||| || ||| || | || |||| | | ||
Sbjct 16173033 CAGCACCCAGGCCAGTATTGAAATTGATTCACTCTATGAAGGAATCGACTTCTATACCTC 16173092
Query 350074 TATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAATGGAT 350131
||||| |||||||| |||||||||| || ||| || | ||| | | || ||||
Sbjct 16173093 CATTACCCGTGCTCGATTTGAAGAAT--TGAATGCTGACTTGTTTCGTGGTACCTTGGAC 16173150
Query 350132 CCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTT 350191
|| || || |||| | ||||| || | ||| ||||| |||| | ||
Sbjct 16173151 CCAGTTGAGAAAGCTCTTCGTGATGCCAAGCTAGACAAGTCCCAGATCCATGATATTGTC 16173210
Query 350192 TTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAAT 350251
| || || || ||||| ||||| || ||| |||| | | ||| || || || |||
Sbjct 16173211 CTGGTGGGCGGCTCTACCCGTATCCCCAAAATTCAGAAACTCCTACAGGATTTCTTCAAT 16173270
Query 350252 GGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304
|| || ||| | ||| | || ||||| |||||||||||||| ||||||||
Sbjct 16173271 GGAAAGGAATTGAATAAGAGC-ATCAATCCTGATGAAGCTGTTGCTTATGGTGC 16173323
Score = 143 bits (158), Expect = 8e-29
Identities = 357/534 (67%), Gaps = 10/534 (2%)
Strand=Plus/Minus
Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATT-A 183320
|||||||||| |||||||||||||| || || || | ||||| || ||||| |
Sbjct 16173325 CTGCACCATAAGCAACAGCTTCATCAGGATTGATGCTCTTATTCAATTCCTTTCCATTGA 16173266
Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380
| |||| ||| || | || |||||||| || || | || || || || || | ||
Sbjct 16173265 AGAAATCCTG-TAGGAGTTTCTGAATTTTGGGGATACGGGTAGAGCCGCCCACCAGGACA 16173207
Query 183381 ACTTCATCGATAT--TACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGT 183438
| |||| ||| | |||| | ||| ||| | ||| | | |||| ||||| ||||
Sbjct 16173206 ATATCATGGATCTGGGACTTGT-CTAGCTTG-GCATCACGAAGAGCTTTCTCAACTGGGT 16173149
Query 183439 CCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATG 183498
||| || | ||| || || | || ||||| |||| || | || | || |
Sbjct 16173148 CCAAGGTACCACGAAACAAGTCAGCATTCAATTCTTCAAATCGAGCACGGGTAATGGAGG 16173089
Query 183499 aaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATG 183558
| | ||||| || || | ||| | |||||||||||||| | || || || |
Sbjct 16173088 TATAGAAGTCGATTCCTTCATAGAGTGAATCAATTTCAATACTGGCCTGGGTGCTGGAAG 16173029
Query 183559 ATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATG--ATCTTGGATT 183616
| | || | ||||| || ||||| || || | || ||||| | | ||||| ||
Sbjct 16173028 AGAGCGTACGCTTAGCACGCTCACAAGCAGTACGGAGGCGACGGACAGCCCTCTTG--TT 16172971
Query 183617 ATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCT 183676
|| | || || | ||||| || | || || |||| ||||||||| | | | ||
Sbjct 16172970 CTCACTGATGTCCTTCTTATGCTTACGCTTGAACTCAGCAATAAAATGGTTGACCATTCG 16172911
Query 183677 TGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATAT 183736
| ||||| ||||| |||||||| || || || ||||| |||| ||| || ||||| ||
Sbjct 16172910 GTTGTCAAAGTCTTCTCCACCTAAGTGGGTGTCTCCAGCTGTAGATTTGACCTCAAAGAT 16172851
Query 183737 TCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790
|| ||||||||| | | ||||| |||||||| || ||||| || | |||||
Sbjct 16172850 CCCATCTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAGGTCAAA 16172797
Score = 105 bits (116), Expect = 2e-17
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667
|||| || | || ||||| || ||||||||||| | |||||| || || |||||||
Sbjct 16172540 ATGCAGTGGTCACAGTACCTGCTTATTTTAATGACTCTCAGCGTCAGGCCACCAAAGATG 16172599
Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727
|||| | |||||| || | ||||| |||||||| |||||||| || |||||||| || |
Sbjct 16172600 CTGGGACCATTGCTGGTCTCAATGTACTAAGAATCATTAATGAGCCAACTGCTGCTGCTA 16172659
Query 349728 TTGCATATGGGCTTGATAAAA 349748
| || ||||| | || ||||
Sbjct 16172660 TCGCGTATGGCTTAGACAAAA 16172680
Score = 93.3 bits (102), Expect = 1e-13
Identities = 131/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264
|| || ||| | || || || || || ||||| | ||||| ||| | | || |||
Sbjct 16171593 GGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTTTTCCAACACGGGAAAGTGGAA 16171652
Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324
|||||||| |||||||| || ||| | || || || || || ||||| || || |||
Sbjct 16171653 ATAATTGCCAATGATCAGGGAAACCGCACCACCCCGAGCTATGTCGCATTCACTGATACT 16171712
Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384
|| || ||||||||||| | ||||| ||||||| ||| || || | || ||||||
Sbjct 16171713 GAACGATTGATTGGTGATGCAGCAAAGAATCAAGTTGCAATGAACCCCACCAACACGGTT 16171772
Query 349385 TTTG 349388
||||
Sbjct 16171773 TTTG 16171776
Score = 89.7 bits (98), Expect = 2e-12
Identities = 116/160 (73%), Gaps = 9/160 (6%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||| | | ||| | ||| |||||||||| || || | || || |||||
Sbjct 19306623 ACCACCATGCAGTCTCAAGACATGATGAAGAGTGGATTCCTGCTG-------TAGTCAGA 19306571
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
||| ||| | ||| ||| ||||| || | |||||| || | |||||||||||||||
Sbjct 19306570 TAAAGTTTGTACATGTTCCAGTTGCTTGCTAGCAAAAC--AGTCTTTGCTGATCAGGAGG 19306513
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
||||||||| | ||| ||||| || || |||| || |||
Sbjct 19306512 AATTCCTTCCTCATCATGAATCTTGGCCTTTATCTTTTCA 19306473
Score = 86.0 bits (94), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
|||||||| | | | | |||| | ||||||| || | |||| ||| || || |||||
Sbjct 5988891 ACCACCACACAGTTTCAAGACAACA-GAAGAGTGGATCCCTTTTCAATGTTGTAGTCAGA 5988833
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
|| | | |||| | ||||| || |||||||| | || | |||||| |||| |
Sbjct 5988832 CAAACTACATCCATTGTGCAGTTGCTTGCCAGCAAATACCAGTCATTGCTGGTCAGA--G 5988775
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
| ||||||| | |||||| |||| || |||||||| || | | | | | || ||||
Sbjct 5988774 ATTTCCTTCCTCATCCTGGCTTTTGGCCTTTACATTTTCTGTTGCACCTAAGGGCTCAAT 5988715
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || | | |||||||| || || |||| | |||||||||||
Sbjct 5988714 GTTGAGACTGATAGTCTTTCCTGTAAGGGTTTAAATGAAAATCTGCAT 5988667
>seq6
Length=67462845
Score = 109 bits (120), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309
|||| || ||||| |||||||| || ||||| ||||||||||| || || ||| ||
Sbjct 6496878 CAGCCTGGACAGCAGCACCATAAGCCACAGCCTCATCTGGGTTTATGCCCCGGGATGGTT 6496819
Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369
| |||||||| || || ||| || || ||| ||||| |||||||||||||| || ||||
Sbjct 6496818 CCTTGCCATTGAAGAACTCTTTAACCAGTTGCTGAATCTTTGGAATTCTAGTAGAGCCAC 6496759
Query 183370 CGACTAATACTACTTCATCGATAT--TACTTTTACTAATTTGTGAATCTTTTAAAACTTT 183427
| || | || | ||||| |||| |||| | | || | ||||||| | |||||
Sbjct 6496758 CAACAAGAACAATCTCATCAATATCAGACTTCTTCAAA--TCAGAATCTTCCAGCACTTT 6496701
Query 183428 TTCAACAGGGTCCATAGT 183445
| ||||| | ||| ||
Sbjct 6496700 CTGGACAGGCTTCATTGT 6496683
Score = 104 bits (114), Expect = 7e-17
Identities = 133/183 (73%), Gaps = 3/183 (2%)
Strand=Plus/Plus
Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774
|| || || || ||||| ||||| |||||||| ||| || ||||| ||||||||
Sbjct 6496147 ACAGCAGCTGCTATTGCTTATGGCCTTGATAA---GAGAGAAGGGGAAAAGAATATTCTG 6496203
Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834
| ||||| | |||||||| || || |||||||| || || || | || | || |
Sbjct 6496204 GTGTTTGACCTTGGTGGTGGAACCTTCGATGTATCTCTTCTCACCATCGACAATGGTGTC 6496263
Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894
|||||||| || ||| ||| ||||| ||||| ||||||||||| |||||| | |||
Sbjct 6496264 TTTGAAGTCGTGGCTACTAATGGAGATACTCATCTGGGTGGAGAAGACTTTGATCAGCGT 6496323
Query 349895 CTC 349897
||
Sbjct 6496324 GTC 6496326
Score = 91.5 bits (100), Expect = 4e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236
|||||||| | ||| | |||||||| ||||| | |||||||| |||| || | |
Sbjct 6496737 ATTGATGAGATTGTTCTTGTTGGTGGCTCTACTAGAATTCCAAAGATTCAGCAACTGGTT 6496796
Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296
||||| || |||||||| ||||| || | || || |||||||| ||||| ||
Sbjct 6496797 AAAGAGTTCTTCAATGGCAAGGAACCATCCCGGGGCATAAACCCAGATGAGGCTGTGGCT 6496856
Query 350297 TATGGTGCTGCTGTTCAGGC 350316
|||||||||||||| |||||
Sbjct 6496857 TATGGTGCTGCTGTCCAGGC 6496876
>seq31
Length=25890693
Score = 107 bits (118), Expect = 6e-18
Identities = 76/87 (87%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| ||||| || || ||||| || ||||| |||||||| |||||||||||||||||||||
Sbjct 2479961 TTCTGAATGTTGTAGTCAGACAAAGTTCGTCCATCTTCCAGTTGTTTTCCAGCAAAGATT 2479902
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCT 140636
|| | |||||||||||||||||| |||
Sbjct 2479901 AGTCTTTGCTGATCAGGAGGAATACCT 2479875
>seq16
Length=47638275
Score = 96.9 bits (106), Expect = 1e-14
Identities = 93/118 (79%), Gaps = 1/118 (1%)
Strand=Plus/Minus
Query 140531 AAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAG 140590
|| |||||||| | | |||||||| || ||||||| || || |||||||| ||
Sbjct 18107560 AAAATGAAGAGAGGGTGCCTTTTGAATGTTGCAATCAGACAAGGTATATCCATCTTCTAG 18107501
Query 140591 TTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTT-CTTTATCCTG 140647
||| || |||||||| || || | ||||||||||||||||||||||| ||||| ||||
Sbjct 18107500 TTGATTGCCAGCAAAAATCAGTCCTTGCTGATCAGGAGGAATTCCTTCCTTTAACCTG 18107443
>seq7
Length=65339388
Score = 96.9 bits (106), Expect = 1e-14
Identities = 103/134 (77%), Gaps = 3/134 (2%)
Strand=Plus/Plus
Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588
|||| || |||| | ||||| |||||||| || | |||||||| || |||| |||
Sbjct 63136577 ACAAAATAAAGAATGGACTCCTTTTGAATGTTGCAGTCAGATAAAACTCATCCATTTTCT 63136636
Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTT--ATCCT 140646
|||||||| ||||||||||| || | ||| || ||| ||| |||| |||| || ||| |
Sbjct 63136637 AGTTGTTTGCCAGCAAAGATCAGTCTTTGTTGCTCATGAGAAATTTCTTCCTTGGATCGT 63136696
Query 140647 GAATTTTAGCTTTT 140660
|| ||||| |||||
Sbjct 63136697 GATTTTTA-CTTTT 63136709
>seq12
Length=57221361
Score = 95.1 bits (104), Expect = 4e-14
Identities = 180/262 (69%), Gaps = 5/262 (2%)
Strand=Plus/Minus
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621
||||||||| ||||| | |||| || | || | | | | | |||||| | ||
Sbjct 37364142 AAAATGAAGAAAATTTCAGAAGTCTACGTTGGGAAGATTCTTAGCAAAGCTGTTGTCACA 37364083
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681
||||| | ||||||||| | | | || | || || |||||||||| || |||
Sbjct 37364082 GTACCTGTTTATTTTAATCAATCTCGGCATCAGGCTACCTAAGATGCTGGAAGAATTATT 37364023
Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAAC--CCACTGCTGCAGCAATTGCATATGGGC 349739
|| | | | | | ||||| || || | | | |||||||| || ||||| |||||
Sbjct 37364022 GGTCTCAGTATACCTAGAATCATCAACTAGCAGCAACTGCTGCTGCTATTGCTTATGGCT 37363963
Query 349740 TTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799
| || |||| | |||| ||||| |||||| || | |||||| | ||| |||| ||||
Sbjct 37363962 TAGACAAAAGGT-TGACACAGAAAGAAATATGCTGACTTTTGACTAAGGAAGTGGCACTT 37363904
Query 349800 TTGATGTATCA--CTACTAACA 349819
||||||||||| ||| |||||
Sbjct 37363903 TTGATGTATCAGTCTATTAACA 37363882
>seq26
Length=31570685
Score = 91.5 bits (100), Expect = 4e-13
Identities = 100/132 (76%), Gaps = 1/132 (1%)
Strand=Plus/Minus
Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588
||||| |||||||||||||| |||||| | || | |||| || | || |||||||
Sbjct 19202803 ACAAGGTGAAGAGTAGACTCCTTTTGAGTGTTGCAGTCAGGCAAAATAAGCTCATCTTCC 19202744
Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648
|| || || |||||| ||| || | || |||| | ||| ||||||||| ||||||||
Sbjct 19202743 AGATGCTTGCCAGCACAGA-CAGTCTTTATTGATAAAGAGAAATTCCTTCCTTATCCTGG 19202685
Query 140649 ATTTTAGCTTTT 140660
||||| || |||
Sbjct 19202684 ATTTTGGCCTTT 19202673
>seq1
Length=89887394
Score = 87.8 bits (96), Expect = 5e-12
Identities = 144/206 (70%), Gaps = 5/206 (2%)
Strand=Plus/Minus
Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591
||||||| ||| ||| ||||| | ||| ||| || | ||| ||||||||| |||
Sbjct 52883761 AGATGAAAAGTGAACTTCTTTTGTACATTGTAACCAAAGTATG----CCCATCTTCCAGT 52883706
Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651
||| |||||||||| | || ||||| || || |||| |||| |||||||| ||
Sbjct 52883705 A-TTTGACAGCAAAGATCTGTATTTACTGATTAGAAGAAATTTCTTCCTTATCCTGGATA 52883647
Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711
| | |||||||| ||| | | ||| || | | | | | || || | || || | |
Sbjct 52883646 CTGGTCTTTACATTTTCACTTGTATCTGAGGCTGTAGCCTGGAGAGTGATGGTTTTCCTG 52883587
Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || ||||| ||||||||||| ||
Sbjct 52883586 GTAAGGGTTTTCACAAAAATCTGTAT 52883561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515214795038120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |