Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq23 217 1e-51
>seq23
Length=36106517
Score = 217 bits (240), Expect = 1e-51
Identities = 461/682 (68%), Gaps = 7/682 (1%)
Strand=Plus/Plus
Query 111613 TCAAAGTCATCAGCAACAAAATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTT 111672
|||||||| ||||| || || ||||| ||||| |||| ||||| || |||
Sbjct 32444245 TCAAAGTCTTCAGCTTTGAAGTCATCAATCGTCTCAACTTTTCGAAGGATTTTGAGCTTT 32444304
Query 111673 GGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAA 111732
||||| || | || | ||| |||||| | || || ||||| |||||||| | |||
Sbjct 32444305 GGAAAAGGCCTTGGTTCTCGCTGAAGCTGCACTTTTAGAGGCTCAATGTGATTCAGGTAA 32444364
Query 111733 ACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCA 111792
| || |||||||| | ||| | || || | |||| || || |||||||| |||
Sbjct 32444365 ATGTGTGCATCTCCCAATGTATGTACAAAATCGCCGGGCTTCAGGCCGGTGATGTGCGCA 32444424
Query 111793 ATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCT 111852
|||||| | ||||| || ||| || ||||| || || |||||||| |||||||| |||
Sbjct 32444425 ATCATGCAGGTGAGCAGGGAGTAGCTGGCAATATTGAAGGGCACACCCAGGCCCATGTCT 32444484
Query 111853 CCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAAAGT 111912
|| || || || | |||||| || || || | | | |||||| || || ||||||
Sbjct 32444485 CCTGACCTCTGGTGTAGCTGGCAGGAGAGCTCACCATTCACCACATAGAACTGGCAAAGT 32444544
Query 111913 ACATGACAAGGAGGCAATGCCATCCCATTCATAAAG---GGTCCCCATGCACACATGATC 111969
|||| || ||||| || |||||| | | | || ||| ||||||| |||
Sbjct 32444545 GCATGGCATGGAGGTAAGGCCATCAGAGGAAGATCTTTTGGATTCCAAGCACACAGGATG 32444604
Query 111970 ATCCTTCTGCTGTAGCGATTA-TGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTAT 112028
|| |||||| | | || | || | ||| || || || || ||||| ||||
Sbjct 32444605 ATTCTTCTGTCATCTGGGTTGGTTTTGATTGT-GTCGATCACTTTTTGCAGCTGATCTAC 32444663
Query 112029 CCCTTTACCAGTATAATCCGCCTGACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTG 112088
|||| ||| | |||||| | | | ||||| ||||||| | |||| ||| ||
Sbjct 32444664 TCCTTGACCTGAATAATCTGAATCTTTATCTTTGTATTCTGCCCCAAAATGTCGCCACTG 32444723
Query 112089 GAATCCATAAATAGGCCCCAGATCTCCCGGGGCTGTATCTGGA-AATTGCTCTCTATTCA 112147
|| ||||||| ||| || | |||||| || | | |||| || | || | ||
Sbjct 32444724 AAAGCCATAAACAGGGCCTAAATCTCCTTCTTCTCTGT-TGGAGAACCCCAGGCTGTCCA 32444782
Query 112148 ACAAATCACTTCTAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTG 112207
| || || | | || | || |||||| ||||| ||||| || || | || | |
Sbjct 32444783 AAAAGTCTCGGGAACCATTGGCATCCCAAATTTTCACACCTTTGGAAGACAGTTCATTAG 32444842
Query 112208 CATTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTC 112267
||||||||||||| | |||||||| | || ||||||| ||| ||||||||| | || |
Sbjct 32444843 CATTTGTGGATCCCTTGATAAACCACAACAGCTCTTCCAAAACACCTTTCCAGAAAACAC 32444902
Query 112268 TTTTAGTAGTTAGCAGTGGAAA 112289
||| || || ||||| |||||
Sbjct 32444903 GTTTGGTTGTCAGCAGAGGAAA 32444924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391935855252520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |