Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq24 91.5 2e-13
seq17 82.4 9e-11
>seq24
Length=35080050
Score = 91.5 bits (100), Expect = 2e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| |||||||| ||||| || || ||||| || || || |||||||||||| | |
Sbjct 30006437 AATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACCCTTGAGGTTGAGCCCAG 30006378
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
||| | ||||| ||| | || || ||||| || |||||||||||
Sbjct 30006377 TGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGG 30006333
>seq17
Length=44067645
Score = 82.4 bits (90), Expect = 9e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || || ||||| ||| | ||
Sbjct 23139465 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 23139524
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGA 27500
|||| ||| | ||| |||||||||| || |||||
Sbjct 23139525 GATACCATCGAGAATGTGAAGGCTAAGATCCAGGA 23139559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570295857084800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |