Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq19 89.7 1e-12
>seq19
Length=42003366
Score = 89.7 bits (98), Expect = 1e-12
Identities = 105/141 (74%), Gaps = 1/141 (1%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||| || ||| |||| ||||| || ||||||||||| | | ||| | | |||||||
Sbjct 16550624 AGGAGAAAATGGGGAGTGGACTCCTTCTGGATGTTGTATTAAGATAA-GCTGGCCCATCT 16550566
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || |||||| || ||||| | |||||||||||| | ||||| |||||| | |||
Sbjct 16550565 TCCAGCTGTTTCCCTGCAAAGATCAACCTCTGCTGGTCAGAGGAGATGCCTTCCCTGTCT 16550506
Query 152013 TGAATTTTTTGTTTGACAGTC 152033
|| || || |||||| ||
Sbjct 16550505 TGGATCTTGGCCTTGACATTC 16550485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153790642008840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |