Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq19 89.7 1e-12 >seq19 Length=42003366 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/141 (74%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||| || ||| |||| ||||| || ||||||||||| | | ||| | | ||||||| Sbjct 16550624 AGGAGAAAATGGGGAGTGGACTCCTTCTGGATGTTGTATTAAGATAA-GCTGGCCCATCT 16550566 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || |||||| || ||||| | |||||||||||| | ||||| |||||| | ||| Sbjct 16550565 TCCAGCTGTTTCCCTGCAAAGATCAACCTCTGCTGGTCAGAGGAGATGCCTTCCCTGTCT 16550506 Query 152013 TGAATTTTTTGTTTGACAGTC 152033 || || || |||||| || Sbjct 16550505 TGGATCTTGGCCTTGACATTC 16550485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153790642008840