Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq80468 84.2 2e-11 seq87050 82.4 6e-11 >seq80468 Length=16579 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| ||||||||||| || || | || || || || || | || ||||| | ||| Sbjct 6216 ATGGCCCTACCTCCATGCCATACCCTTTGCCAATTCTATGTGGTGAATGGTGAGCTGTCC 6157 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||||| || | || ||||||||||| || || |||||||| || | Sbjct 6156 TGCCAGCTGTACCAGAGGTCAGCAGACATGGGCCTTGGTGTGCCCTTCAACATCGCCAGC 6097 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || || | || |||||||| | || || | ||||| || || Sbjct 6096 TACGCCTTGCTCACCTACATGATTGCACACATCACAGGCCTGAA 6053 >seq87050 Length=16872 Score = 82.4 bits (90), Expect = 6e-11 Identities = 171/251 (68%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 18799 GCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAAT-CA 18857 |||| |||| ||||| ||||||| |||||||| || ||||| ||||| | | ||| || Sbjct 14761 GCCCAGTTTATGGCTTTTAGTGGAGGCATTTTGGGGCAGAATACAAAGA-TATGAATTCA 14819 Query 18858 AACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAAC 18917 || |||| | | || | | || || ||| ||| || | || || ||| | || ||| Sbjct 14820 AATTATTCAAGTCGAGCAGTAGACCAACTGAAAAAGGTGACTGACACGATTGACACCAAC 14879 Query 18918 CCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTA 18977 || || | || |||| | | | | ||||||||||||| || | || | ||||| Sbjct 14880 CCTGATGACAGAGGAATCACTTTGTGTGCTTGGAATCCAAAATATCTTCCTCTCATGGTC 14939 Query 18978 CTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAA 19037 || || ||||||| | | || | | ||| || | ||| || | | ||||| | | Sbjct 14940 TTATCTGCATGTCAGGCCCTTTGCCCATCTTATGTGGAAAATAGTAAGCTGTCCTGTC-A 14998 Query 19038 GTATACCAGAG 19048 || |||||||| Sbjct 14999 GTGTACCAGAG 15009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398853809487210