Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq54776 104 2e-17 seq51126 86.0 6e-12 >seq54776 Length=46456 Score = 104 bits (114), Expect = 2e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 15947 TGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCC 16006 ||||| || ||||| || |||||||||||||||||||||||||| |||||||||||| Sbjct 6450 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATATTTTCC 6391 Query 16007 ATAAAATCAAAAGGATTTTTTG 16028 ||||||||||| ||||||| || Sbjct 6390 ATAAAATCAAAGGGATTTTCTG 6369 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 16047 ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106 |||| | ||||| | |||||| || || ||||| || |||||||||||||| ||| ||| Sbjct 5626 ATCCAAGTTCCACAAGTAATCTGTCAGCTACAAACTCAATATACTGTTTCATCAAAACAC 5567 Query 16107 AGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAA 16149 | |||||||| || | ||| || | |||||||||||||| Sbjct 5566 AATTCATTCCAATGAGGCCAACTGGCAAGGCTTCTGTTAAAAA 5524 >seq51126 Length=15735 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || || || || || | || || ||||| || || || ||||| ||||| ||||| || Sbjct 13103 TCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCGGGCATCAGTCCCCGTTTCTTG 13162 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| ||||| | ||||| |||||||||||||| || ||||| || || ||||| || Sbjct 13163 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCG 13222 Query 16379 AC 16380 || Sbjct 13223 AC 13224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461739963406800