Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq100590 134 2e-26 seq51126 111 2e-19 seq133181 102 1e-16 seq5109 89.7 6e-13 >seq100590 Length=39123 Score = 134 bits (148), Expect = 2e-26 Identities = 112/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 31637 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATATGGTTCAATG 31578 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 |||||||||||||| | ||| ||||||||||| ||||| |||||||| || | | |||| Sbjct 31577 GACTCATTATTTCCAAGAATCTGAGCAGTTGAAGCAGTAGGCATAGGGGCAATAAGTAAA 31518 Query 62508 CTATTTCTAAGACCGTA 62524 |||||||| | ||| || Sbjct 31517 CTATTTCTTATACCATA 31501 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || |||||||||||| |||||||| ||||||||||| || | ||| || || || | | Sbjct 16086 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAAAAAAGGTCCCTGGCACG 16027 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 ||||| || |||||||| ||||| || | ||| || ||| | | ||||| ||||||| Sbjct 16026 CTGTTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATATCTAAATGCCA 15967 Query 63383 CGGTTCCAAGTATATGGC 63400 || |||| ||| || || Sbjct 15966 AGGCTCCAGGTAAATAGC 15949 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 |||| || |||||||| || | | || || || | ||| || || || || || || | Sbjct 20700 CATAGGTTTCATATGGGCCATGATCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCAT 20641 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 ||||||||||||||||||| | |||||| | || || || || || ||||| |||| Sbjct 20640 AATAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGAT 20581 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805 | | | |||||||| || || || | ||||| || ||||| || || || | ||| | Sbjct 20580 ATCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 20521 Query 62806 TCTTATTAGA 62815 ||||| || Sbjct 20520 GTTTATTTGA 20511 Score = 93.3 bits (102), Expect = 5e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065 |||| || | ||| |||||||| ||||| | || || | || || || || || |||| Sbjct 5317 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 5258 Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 5257 TGGCATAGTCTGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 5198 Query 64126 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171 ||| || ||||| || ||| | |||| ||||| || || ||||| Sbjct 5197 GTTCCACAGTTGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 5152 >seq51126 Length=15735 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||| | ||| || ||||| ||||| |||||||| || || || || | Sbjct 13101 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCGGGCATCAGTCCCCGTTTCT 13160 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || || ||||||||||||||||| || |||||||| | Sbjct 13161 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 13220 Query 33724 C 33724 | Sbjct 13221 C 13221 Score = 96.9 bits (106), Expect = 4e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 14079 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 14138 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 || || || ||||||||||| | || || || ||||| |||||| Sbjct 14139 AATTTGGAAGCCGTAGAAACAGCGGGCTTCTGTGATCTGAACTTCT 14184 >seq133181 Length=14061 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||||| | | || |||||||||| ||| ||| ||||||||| || Sbjct 8459 GTTACTTTCTATGATGTATATGTTATTCTACAAGCTTTTATGCTGAGTACTGCAGTAATT 8518 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| | ||||| || |||||| ||||| || ||||||||||| ||| ||| | |||| Sbjct 8519 CTTGGTTTGACTGTATATACTCTGCAATCTAAAAGAGATTTCAGCAAATTTGGAGCAGG 8577 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 188241 GCATTTCTAAGAAAAGTCTACGGTATCCTTG-TCTACAATTTCCTTTAACAACGGCAACA 188299 || |||||||||||||||||| | |||||| | | ||| ||| ||||| || | ||| Sbjct 2491 GCCTTTCTAAGAAAAGTCTACAGCATCCTTTCTTTTCAAGTTCTCTTAACTACAGTGACA 2550 Query 188300 GCTGCAGTATTTTTATACTTTGAATGCATTCGGACATTTATACAAGGGAG 188349 ||||| | |||||||||||||| | || ||||||||| |||| || || Sbjct 2551 TCTGCATTTTTTTTATACTTTGAGTCTATACGGACATTTGTACATGGAAG 2600 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 188377 CGGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATCT 188436 ||||||| | || || |||| ||||||| |||| ||||| |||| |||||||| ||||| Sbjct 3624 CGGATCTTTGGGTTTCATTTCAGCATTGAGTTTAAACAGATATAAGCATCCCCTTAATCT 3683 Query 188437 GTACCTACTTTGTGGATTT 188455 |||||| |||| ||||||| Sbjct 3684 GTACCTGCTTTTTGGATTT 3702 >seq5109 Length=24246 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 |||||||||||||| ||||||||||||||||||||||| || || | || |||||| Sbjct 5439 AAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAAAA 5498 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 34074 || || || |||| ||| || || ||||| | | || ||| || |||| Sbjct 5499 TACTTCTCATCTGATGTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATA 5547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628766292716640