Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq133181 183 4e-41 seq100590 140 4e-28 seq51126 114 2e-20 >seq133181 Length=14061 Score = 183 bits (202), Expect = 4e-41 Identities = 154/189 (81%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290 || |||||| | ||||||||| | |||||| |||| ||| |||||||||||||||||| Sbjct 13791 TTTTTATTAACTGCTTCCAAAACCCGTAACAAGTGCAGGAATAGATTGATGATATCCAAG 13732 Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350 |||| ||||| | ||||| ||||| |||||||| || |||| ||| || |||||||| Sbjct 13731 TAGAGGTTGATGGCAGCTAATACATACTCTTCAGGTGACAGCTGATGCATCAGTGAGTGT 13672 Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410 |||||||||| ||||||||| ||||| | |||||| || | ||||| || ||||| ||| Sbjct 13671 GTGTCATAGACAATGAATCCACAGAAAAGAAGGGCTCCTACAGCAGCCATGACCAATTCC 13612 Query 9411 ACTGTTTCA 9419 ||||| ||| Sbjct 13611 ACTGTCTCA 13603 Score = 134 bits (148), Expect = 2e-26 Identities = 101/119 (85%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| ||||||||||| || ||||| ||||||||| |||||| | ||||| Sbjct 8577 CCTGCTCCAAATTTGCTGAAATCTCTTTTAGATTGCAGAGTATATACAGTCAAACCAAGA 8518 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 | ||||||||| ||||||| |||||||| | || |||| ||||||||||||||||| Sbjct 8517 ATTACTGCAGTACTCAGCATAAAAGCTTGTAGAATAACATATACATCATAGAAAGTAAC 8459 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 9738 CTCCCTTGTATAATTTTCCGCATGCAGTCAAAGTATAAAAATACTGCAGTTGTTGCCGTT 9797 || || |||| || | |||| || | |||||||||||||| | ||||| ||| | || Sbjct 2600 CTTCCATGTACAAATGTCCGTATAGACTCAAAGTATAAAAAAAATGCAGATGTCACTGTA 2541 Query 9798 GTTAAAAGAAATTGTAGACAAAGGATACCGTAGACTTTTCTTAGAAATGC 9847 ||||| |||| ||| | | ||||||| | |||||||||||||||||| || Sbjct 2540 GTTAAGAGAACTTGAAAAGAAAGGATGCTGTAGACTTTTCTTAGAAAGGC 2491 >seq100590 Length=39123 Score = 140 bits (154), Expect = 4e-28 Identities = 113/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 31637 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATATGGTTCAATG 31578 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 |||||||||||||| | ||| ||||||||||| ||||| |||||||| || | | |||| Sbjct 31577 GACTCATTATTTCCAAGAATCTGAGCAGTTGAAGCAGTAGGCATAGGGGCAATAAGTAAA 31518 Query 65301 CTATTTCTAAGACCGTA 65317 |||||||| | ||| || Sbjct 31517 CTATTTCTTATACCATA 31501 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| |||||||||||||| | || || || || || || || || | || Sbjct 5317 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 5258 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 5257 TGGCATAGTCTGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 5198 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || ||||| || ||| | |||| |||||||| || ||||| Sbjct 5197 GTTCCACAGTTGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 5152 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| |||||||| ||||||||||| || | ||| | || |||| | Sbjct 16086 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAAAAAAGGTCCCTGGCACG 16027 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 ||||| || |||||||| ||||| || | ||| || ||| | | ||||| ||||||| Sbjct 16026 CTGTTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATATCTAAATGCCA 15967 Query 66176 CGGTTCCAAGTATATGGC 66193 || |||| ||| || || Sbjct 15966 AGGCTCCAGGTAAATAGC 15949 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478 |||| || || ||||| || | | || || || ||||| || || || || || || | Sbjct 20700 CATAGGTTTCATATGGGCCATGATCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCAT 20641 Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538 ||||||||||||| ||||| | |||||| | || || || | || ||||| |||| Sbjct 20640 AATAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGAT 20581 Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598 | | | |||||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 20580 ATCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 20521 Query 65599 TCTTATTAGA 65608 ||||| || Sbjct 20520 GTTTATTTGA 20511 >seq51126 Length=15735 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | ||| |||||||| ||||| |||||||| || || || || | Sbjct 13101 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCGGGCATCAGTCCCCGTTTCT 13160 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| || ||||| || ||||||||||| |||||||| || || ||||| | Sbjct 13161 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 13220 Query 36300 C 36300 | Sbjct 13221 C 13221 Score = 102 bits (112), Expect = 1e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||||| || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 14079 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 14138 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523 ||||| || ||||||||||| | || || || ||||| |||||| Sbjct 14139 AATTTGGAAGCCGTAGAAACAGCGGGCTTCTGTGATCTGAACTTCT 14184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657074161507920