Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq80468 127 2e-24 seq13093 107 2e-18 seq79877 87.8 2e-12 >seq80468 Length=16579 Score = 127 bits (140), Expect = 2e-24 Identities = 126/163 (77%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 ||||||| |||| ||| || |||| || || || | |||||||||||||||||| || | Sbjct 6054 TCAGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAAGGCGTAGCTGGCGATGTTGAAGG 6113 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || ||||||||||| || ||||||||||||||||||||||||||||| || Sbjct 6114 GCACACCAAGGCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCA 6173 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 |||| || || || || | || || ||||| || ||||| Sbjct 6174 CCACATAGAATTGGCAAAGGGTATGGCATGGAGGTAGGGCCAT 6216 >seq13093 Length=55778 Score = 107 bits (118), Expect = 2e-18 Identities = 108/138 (78%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 20963 CAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAG 21022 ||| | ||| |||||||| || || |||||| |||| ||| || |||| || | || Sbjct 52562 CAAAGAGTGTACAAAGTCACCTGGCTTCAGGCG-GTGATGTGTGCAATCATGTAGG--AG 52506 Query 21023 GAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTA 21082 |||| ||| |||| |||| || || || || ||||||||||| || ||||||||||| Sbjct 52505 CAGGGAGTATTTGGCAGTGTTGAAGGGCACACCCAGGCCCATGTCTGCTGACCTCTGGTA 52446 Query 21083 CAGCTGGCAGGACAGCTC 21100 |||||||||||||||||| Sbjct 52445 CAGCTGGCAGGACAGCTC 52428 >seq79877 Length=23208 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 21413 CGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCC 21472 ||||||||| || | | ||| | ||| ||||||||||||||||||||||| || || Sbjct 4430 CGACAGTTCTGTAGCATTTGTGTATCCCTCGATAAACCACAGCAACTCCTCCAAAACACC 4489 Query 21473 CCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACTCGTCCCTGAGGTTATATCGGGC 21532 | |||| || || | |||||| || | ||||||||| | | || ||| | || || || Sbjct 4490 CTTCCAGAATACTCGTTTGGTTGTCAGCAGAGGAAATGCACCTCTCAGGCTGTAGCGCGC 4549 Query 21533 CTGAAGCCCGAACACGGACCTGGTGCCCACGCCCGTCCTGTCCTCCCTCTGCACGCCGTG 21592 ||| | |||||| || ||| || |||||| ||| ||| | | |||| Sbjct 4550 CTGCGTGCGGAACACCGATAGGGTTCCGGTGCCCGTGTGGTCATCCTTTCCAAAGCCGCA 4609 Query 21593 TTTAATAATTAAATCCAGGTGCGCCAAGTACTGCAGCTCGCCGTGG 21638 | | ||| || | ||| ||| |||||| ||||| |||||| Sbjct 4610 ACTGAGAATGTGCTCGATCTGCCCCAGGTACTGTAGCTCCCCGTGG 4655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427079796966240