Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq43874 107 2e-18 seq110334 95.1 1e-14 >seq43874 Length=6976 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| || ||| || || | | ||||| ||||| || ||| Sbjct 1061 GTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTACGCCCATCTTCCAGCTGCTTTCCA 1002 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||| | ||||| || || || ||||| || ||||| ||| | || | || Sbjct 1001 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT-TGAATCTTGGCCTT 943 Query 139688 AGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | | || | |||||| ||||||||||||| | ||| | ||||| ||||||| || Sbjct 942 AACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGT 883 Query 139747 TTTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 882 CTTCACGAAGATCTGCAT 865 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| | ||| | || | ||| | || |||||||| || ||||| || ||| Sbjct 864 GCCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 805 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| | ||||| ||||| || || ||| |||| || | ||||| || || || Sbjct 804 CAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGG 745 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| |||||||||| Sbjct 744 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCAC 685 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||| || |||| || || || || || ||||| Sbjct 684 CTCCAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAGATCTGCAT 637 >seq110334 Length=45663 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| |||||||| ||||| | |||| ||||| ||||| || || Sbjct 17559 GTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 17618 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || | ||||| || || || |||||||| || || ||| || || Sbjct 17619 GCAAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 17678 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | ||||||||||| | ||| | ||||||||||||| || Sbjct 17679 ACATTCTCAATGGTGTCACTTGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 17738 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| |||||||| Sbjct 17739 TTCACGAAGATTTGCAT 17755 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 ||||| | || | ||| | || |||||||| |||||||| ||||| | |||| Sbjct 17082 AAACGTAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGG 17141 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 ||||| ||||| || || ||| |||| || | ||||| || || || ||||| || Sbjct 17142 CCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCC 17201 Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726 || || ||| || || | | || | ||||| |||| ||||| || | ||| Sbjct 17202 TTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTG 17261 Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | ||||||||||||| || || ||||| || |||||| Sbjct 17262 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 17300 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| |||||||| ||||| | |||| ||||| ||||| || || Sbjct 17331 GTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 17390 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || | ||||| || || || ||||| || || || ||| || || Sbjct 17391 GCAAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 17450 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| |||| ||||| || | ||| | ||||||||||||| || Sbjct 17451 ACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 17510 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 17511 TTCACGAAGATCTGCATA 17528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495235957569600