Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq110334 89.7 3e-13 >seq110334 Length=45663 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| || || | |||| |||| ||||| ||||||||||| || || ||||||||||| Sbjct 17300 ACCACCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGA 17359 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | || | || |||| ||||| || ||| || | | |||||||||| ||| Sbjct 17360 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGG 17419 Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||| || || || | | | ||| || || | | ||| ||||| |||||| Sbjct 17420 GATGCCCTCCTTATCCTGGATCTTGGCC---TTCACATTCTCAATGGTGTCACTGGGTTC 17476 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || || || || || || || ||||| || ||||| Sbjct 17477 CACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 17527 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/234 (69%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| || || | |||| |||| ||||| ||||||||||| || || ||||||||||| Sbjct 17528 ACCACCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGA 17587 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | || | || |||| ||||| || ||| || | | |||||||||| ||| Sbjct 17588 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGG 17647 Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 |||||||| || || | | | ||| || || | | ||| ||||| | || | Sbjct 17648 GATGCCTTCCTTATCCTGGATCTTGGCC---TTCACATTCTCAATGGTGTCACTTGGCTC 17704 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 || ||||| || || || || || || || || || ||||| |||||||| || Sbjct 17705 CACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 17758 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || || || || || | |||| |||| ||||||||||| || || ||||||||||| Sbjct 17073 CCACCCCTCAAACGTAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 17132 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | | || | || |||| ||||| || ||| || | | |||||||||| ||| Sbjct 17133 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 17192 Query 33263 ATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 ||||| || || || | | | ||| || || | | ||| ||||| |||||| Sbjct 17193 ATGCCCTCCTTATCCTGGATCTTGGCC---TTCACATTCTCAATGGTGTCACTGGGTTCC 17249 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || || || || || || || ||||| || ||||| Sbjct 17250 ACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 17299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318258791249124