Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq77642 107 2e-18 >seq77642 Length=29400 Score = 107 bits (118), Expect = 2e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| ||||| || || || ||| ||||||| ||||||||||||||| ||||||| || | Sbjct 28187 AGGGTTACCTTGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACTTGGAGGAGGTGA 28128 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 |||| | |||||| | ||| ||| || ||| | ||||||||||| || || || | Sbjct 28127 TGCCCCTGGCTGAGAGCCAGAGCCCAGACATCAAGAAACACGTGAACTCCCTTGGGGAAA 28068 Query 10260 ATCTAAAGACCCTAAGGCT 10278 | || ||||| || ||||| Sbjct 28067 AGCTGAAGACACTCAGGCT 28049 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| || || ||||| |||||||||||||||||||||||||| || || || ||||| | Sbjct 26002 AGCTCCAAGAGAAAGGGGTCTACAAAGCCATGAGTGAATTTGATATCTTCATCAACTACA 25943 Query 10419 TAGAAGCATACATGACCATGAAAAT 10443 ||||| | |||||||| ||||| || Sbjct 25942 TAGAAACCTACATGACAATGAAGAT 25918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546465500954880