Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq132833 179 5e-40 seq13536 123 4e-23 >seq132833 Length=11388 Score = 179 bits (198), Expect = 5e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693 ||||| |||| | || ||| |||||||||||| || |||| || ||||| |||||| Sbjct 8127 GTCTGGAACAAACGCTCATCATCCCATTCTGGATGCTCCTGTTTAAGCACATCACACACT 8186 Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753 ||||| || || | ||||| || || ||||||||||| |||||||||||||| ||||| Sbjct 8187 CTGTTATGCTCTCGCAGCCAAATTGTGGCGTACATCATCAGACCAGGCACCAGACCAAAC 8246 Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813 |||| || || ||||| | |||| | ||| || || | |||||||||||||| | | Sbjct 8247 ACCTCCTGTCCCACAGCAAACCGCAGGTGTTCAGGGACATGAGGAGGATAGATCATCTCC 8306 Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATCT 9862 ||||| ||||||||| | ||| |||||||| || || ||||| |||| Sbjct 8307 ACCTGAGTATCTTTGACTGTGGGAGGATACATCTCTCCATCAATTATCT 8355 Score = 116 bits (128), Expect = 5e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087 |||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | || Sbjct 8705 TCTTACCCCATGACCCAGTCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 8764 Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147 ||| || || ||||| || || |||| || |||||||| || || |||||||||||||| Sbjct 8765 AAATTGATGGGTGAAGTGCTGAGCAAAGAATGCAAACATCAAATTTGTGCCCTGGGGATC 8824 Query 10148 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGAtt 10207 || | || | || | || ||| ||||||||||| | | | | | || || | Sbjct 8825 AGGGATAAACTTTCTTCTTAGGAGAAATTTTTCCACAATCACTTCTGAAGCAGGAAGCTC 8884 Query 10208 ttttttACCTGG 10219 ||| |||||||| Sbjct 8885 TTTCTTACCTGG 8896 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346 |||||||| || || | |||||||| || || | || || || || |||| || | Sbjct 9299 TCACCTTTCACACCCATGGGAGTTGGGCAGTCATCAGCCACAGGGGGAAGAACTCTGGTA 9358 Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406 |||||||||||||| || || |||||||||||| ||| | |||| || || || | Sbjct 9359 TAATAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGTGCATTATAAGTT 9418 Query 10407 GGAGGGCTGTCAATCAAATCGGATCTACCTGAA 10439 || || ||||||||||||| ||||| ||||| Sbjct 9419 GGTGGACTGTCAATCAAATGTGATCTGGCTGAA 9451 Score = 87.8 bits (96), Expect = 3e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381 ||||| | |||||| |||| | |||| ||||| || | |||||||| ||||| | Sbjct 7518 CTTACCCTGCCAGCATTTTGCCTACTGAATGATTCGACAAACTGGGTAAGCCCGTGTTCC 7577 Query 9382 ATGAGTATGGAATTGTTGTAAACGAAGTTAATGTAGTCATACT-TTGTTTTATCAATCTC 9440 | | |||||| |||||||| | || | |||| |||| ||| | | || |||| Sbjct 7578 AGTAATATGGAGTTGTTGTAGATAAACTGTCGATAGTTGTACTCTTGGTCT-TCGATCTG 7636 Query 9441 AAACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACG 9500 ||| | || |||| || | ||||||||| || | |||||||||| | | ||||| Sbjct 7637 AAAGGTGTCAGGCAAAAGGGGATGCCAGTGGTAGAGTGTGTTAAACTCAGCAGCAATACG 7696 Query 9501 ATTTTGGTACTGGAA 9515 |||||||||||||| Sbjct 7697 GTTTTGGTACTGGAA 7711 >seq13536 Length=50127 Score = 123 bits (136), Expect = 4e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798 ||||||| || || |||| || || || || ||||| | ||||||||| | || | Sbjct 15544 TCTTGACAATGTTGAAGCCCATCTCGCCACCAAATGTGCTTGACTTCCAGTAATCTGGAG 15603 Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858 | |||||| ||| ||| |||||| ||||||||||| |||| ||| | || | || | Sbjct 15604 AACAGATGGGATTCCCCAAGAGGCCCTTGAGGGAAAAGGGAGACCCAATTTCTATCATAC 15663 Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918 |||| || ||||||| ||| ||| || ||| || | | | ||| | ||| ||||||| Sbjct 15664 TCTCCCCAAAGATGGAGTTTGGATGGCACTTCTCAAGAAGTAGTCCTGGGTAGAACTCCA 15723 Query 8919 CAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974 || |||||||||||||| || || | || || || || | |||||||||| Sbjct 15724 AGGCGTCGATGTCTCCGTACAGCTCCTCCAACTCAGCTGCCATCTGCTTTTCTCCT 15779 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/138 (75%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 10029 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCC--TCGCGCCAAATCAGTCCTAA 10086 ||||||||||| |||| | || |||||| | || || || |||| | ||| | | Sbjct 23872 CTTACCCCATGGCCCAAGGCCTTGGTGAAGCCAGGACCCATCTTGCCAGA--AGTTTTGA 23929 Query 10087 AAAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGAT 10146 | |||||||| ||||| ||||| |||| ||||||||||| | ||||||||| ||||| | Sbjct 23930 AGAACTGGTGGGTGAAGTGTTGTGCAAAGAAGGCAAACATGAGGTTGGTGCCTTGGGGGT 23989 Query 10147 CGGGAGTGAAGGTCCTCC 10164 |||| |||| ||||| Sbjct 23990 CGGGTATGAACTCCCTCC 24007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 707342112690720