Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq43874 107 2e-18 seq110334 86.0 6e-12 seq39705 86.0 6e-12 >seq43874 Length=6976 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | |||| ||||| || || || || || | ||| || ||| | Sbjct 863 CCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 804 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||| |||||||| |||||| ||||||| | || ||||| || || || Sbjct 803 AGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 744 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || || ||||||||| ||| ||||| | | || || Sbjct 743 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACC 684 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| || || ||||||||||||||||| Sbjct 683 TCCAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAGATCTGCAT 637 Score = 105 bits (116), Expect = 6e-18 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||| || ||||| ||||| || | |||| ||||| || || || || || | ||| || Sbjct 1098 TTAGACACCTCCCCTCAAGCGAAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTA 1039 Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 ||| || || ||| |||||||| ||||| ||||||| | || ||||| || Sbjct 1038 GTCGGACAGGGTACGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTC 979 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953 || || || || || ||||| | ||| || ||||| ||| ||| ||||| | | Sbjct 978 AGGGGGGATGCCCTCCTTGTCTTGAATCTTGGCCTTAACGTTCTCGATGGTGTCGCTGGG 919 Query 94954 GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || | |||||||| || || || || || ||||| ||||||||||||| Sbjct 918 CTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCATGC 863 >seq110334 Length=45663 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || ||||| || | |||| ||||| || || || || || | ||| ||||| Sbjct 17073 CCACCCCTCAAACGTAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 17132 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 17133 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 17192 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || || || | || || ||||| || | | |||||| | | || || Sbjct 17193 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACT 17252 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || || || ||||| ||||||||||| Sbjct 17253 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 17299 >seq39705 Length=33086 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || || || || | ||||| || | |||| | || ||| Sbjct 4012 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCAGCCATTCTC 4071 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||||||| || |||| || | | |||||||| || || || || |||||||| | Sbjct 4072 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTG 4131 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||||| || |||| | | | |||||| | | | ||| || | |||||| | || Sbjct 4132 GATTTTAGCTTTGATGTTTTCAATGGTGTCACTGGGCTGGACCTCGAGTGTGATGATCTT 4191 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | | || ||||||||||||||||| Sbjct 4192 GCCCATTGGGGTCTTCACAAAGATCTGCAT 4221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447542901121680