Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq110334 86.0 5e-12 seq1098 82.4 6e-11 >seq110334 Length=45663 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||| || || || || || || || || ||||| ||| | || |||| | Sbjct 17758 AAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCA 17699 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || ||||| ||| | || || || || ||||| |||||| ||||| || Sbjct 17698 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCGGAC 17639 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || || || | ||| ||||| || | ||||||| | || | | ||||| Sbjct 17638 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 17579 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||||| |||||||| || | ||| |||| Sbjct 17578 AACATTCAGAAAGAGTCGACCCTGCATCTGGT 17547 >seq1098 Length=22631 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| ||||| | || | ||||||||||||| || | ||| ||||| ||| | ||| Sbjct 2629 GATAAGGAAGGAATTCCTCCTCATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 2688 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | ||| || | ||||| | ||||||||| ||||| ||| | ||| | |||| | Sbjct 2689 GATGGACATACCTTGTCTGATTACAGCATTCAAAAGGAGTCCACTCTTCATCTTGTGTCG 2748 Query 115499 AGA 115501 ||| Sbjct 2749 AGA 2751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424651755032560