Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq116887 127 1e-24 seq110334 98.7 7e-16 seq38557 93.3 3e-14 seq64190 89.7 3e-13 >seq116887 Length=1284 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 372 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 313 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 312 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 278 >seq110334 Length=45663 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| |||| ||||| |||| ||| || || ||| || ||||| |||||||||| Sbjct 17299 TACCACCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAG 17358 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | || || || ||||| || || | || || || | || Sbjct 17359 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGG 17418 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||| || || ||| || || ||||||||||| | || || | ||| | Sbjct 17419 GGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCA 17478 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || || || || || |||| ||| |||||||| |||||||| Sbjct 17479 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 17527 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/235 (69%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| |||| ||||| |||| ||| || || ||| || ||||| |||||||||| Sbjct 17527 TACCACCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAG 17586 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | || || || ||||| || || | || || || | || Sbjct 17587 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGG 17646 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT---T 38265 ||| |||||| || ||| || || ||||||||||| | || | ||||| | Sbjct 17647 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGT---CACTTGGCT 17703 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | || || | || || || || || |||| ||| |||||||| || ||||| || Sbjct 17704 CCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 17758 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| |||||||| | |||| || || || ||| || ||||| ||||||||||| Sbjct 17073 CCACCCCTCAAACGTAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 17132 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | || || || ||||| || || | || || || | |||| Sbjct 17133 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 17192 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || || ||| || || ||||||||||| | || || | ||| ||| Sbjct 17193 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACT 17252 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || |||| ||| |||||||| |||||||| Sbjct 17253 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 17299 >seq38557 Length=84320 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGC-TCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGT 38163 |||||| | |||||||||| | ||||||||||| ||||| |||||||| |||| | | Sbjct 72191 CAACACAAGATGAAGAGTGGATTTCCTTTTGAATGTTGTAGTCAGACAAGGTACGTCCAT 72250 Query 38164 CGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGT 38223 | || | ||| || | ||||| || || | ||| ||||| | || | ||||| || | Sbjct 72251 CTTCCACTTGCTTGTCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 72310 Query 38224 CCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAG 38283 || || || ||| ||||| | || ||| | |||||| | | |||| | Sbjct 72311 CCTAGATCTTGGCCTTTACATTTTCTACTGTAACCAAGGGTTCAACCTTGAGAGTAAAGG 72370 Query 38284 TTTTACCCGTCAA-GGTTTTCACGAATATCTGCATGTT 38320 | || ||||| || ||||||||| || |||||||| || Sbjct 72371 TCTTCCCCGTTAAGGGTTTTCACAAAAATCTGCATCTT 72408 >seq64190 Length=38817 Score = 89.7 bits (98), Expect = 3e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 |||||||||| || ||||||||| ||||| |||||||| |||| | || || | ||| Sbjct 9525 ATGAAGAGTGGACTTCTTTTGAATGTTGTAGTCAGACAAGGTACGTCCATCTTCCAGTTG 9466 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || || ||||| || | | ||| ||||| | || | ||||| || ||| || || Sbjct 9465 CTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 9406 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 ||| ||||| | | ||| || | ||||| || | | ||||| || || | Sbjct 9405 GGCCTTTACATTTTCTATTGTAACTGAAGCTTCAATCTCGAGAATGATAGTCTTCTCCAT 9346 Query 38294 CAAGGTTTTCACGAATATCTGCATGTT 38320 | |||||||||||| |||||||| || Sbjct 9345 AAGGGTTTTCACGAAAATCTGCATCTT 9319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334402075316078