Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq100590 116 4e-21 seq51126 111 2e-19 seq54776 91.5 2e-13 seq5109 84.2 2e-11 >seq100590 Length=39123 Score = 116 bits (128), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| || | ||||| || | || || || || ||||||||||| || || Sbjct 31634 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATATGGTTCAATGGAC 31575 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 ||||||||||||| ||| ||||||||||| || |||||||| | |||| | ||| ||| Sbjct 31574 TCATTATTTCCAAGAATCTGAGCAGTTGAAGCAGTAGGCATAGGGGCAATAAGTAAACTA 31515 Query 47448 TTTCTTACTCCATA 47461 ||||||| ||||| Sbjct 31514 TTTCTTATACCATA 31501 Score = 89.7 bits (98), Expect = 6e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109 |||| || ||||| ||||||||||| | ||| ||| |||| || | |||||| || | Sbjct 33858 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 33799 Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169 | | ||| || || |||||||| || |||||||| ||| ||||||| | | || Sbjct 33798 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAACTGCCATCTTGAGAACGGTTT 33739 Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 | || | || ||||| || || ||||||| ||| || | ||| || || Sbjct 33738 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGG 33690 >seq51126 Length=15735 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || || | |||||| ||||| || | || ||||||||||| | ||| | Sbjct 13101 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCGGGCATCAGTCCCCGTTTCT 13160 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | ||||||||| || ||||| || ||||||||||| || ||||| || || ||||||| Sbjct 13161 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 13220 Query 19103 CAACTAGTCTTTCTCC 19118 | || | | |||||| Sbjct 13221 CGACAACACGTTCTCC 13236 Score = 105 bits (116), Expect = 8e-18 Identities = 112/146 (77%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || || ||||||| | ||||||||||||| || || | ||| |||||||| Sbjct 11668 TTAGAAGTCGGCATCCAAGGTAAAAGAATTCTCTG--TTGGACCTGACATCACTCCCATC 11725 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 || ||||| ||| | |||||||| |||||||| |||||||| || || | ||| || Sbjct 11726 TTCTGATACTCGCCCACTCTTTTCTCAAAGAAGTTAGTTTTCCCTTCCAGTGAAATGTTC 11785 Query 18730 TCCATAAAATCAAATGGATTTTTTAC 18755 ||||| || ||||||||||||| ||| Sbjct 11786 TCCATGAAGTCAAATGGATTTTCTAC 11811 >seq54776 Length=46456 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732 ||||| || | ||||| ||| ||||||||||| |||||||| ||||| || ||| |||| Sbjct 6450 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATATTTTCC 6391 Query 18733 ATAAAATCAAATGGATTTTTTACAT 18757 ||||||||||| ||||||| | ||| Sbjct 6390 ATAAAATCAAAGGGATTTTCTGCAT 6366 >seq5109 Length=24246 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/130 (75%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 19334 AAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATA 19393 |||||||| |||||||||||||| || ||||||||||| ||||||||||| ||||| | Sbjct 5428 AAAATCTT---ACCAAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 5484 Query 19394 CATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAG 19453 || ||||||| || |||||||| || | | ||||| | | | ||| || | Sbjct 5485 TGTGAGAGATAAAATACTTCTCATCTGATGTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 5544 Query 19454 ATAAATCTAC 19463 |||| || || Sbjct 5545 ATAAGTCAAC 5554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561170513938320