Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq80468 125 6e-24 seq13093 113 4e-20 >seq80468 Length=16579 Score = 125 bits (138), Expect = 6e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| ||| || |||||||| ||||| | | ||||||||||||||| ||||| Sbjct 6056 AGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAAGGCGTAGCTGGCGATGTTGAAGGGC 6115 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || || |||||||| | ||||||||||| ||||| || || ||||| || | | Sbjct 6116 ACACCAAGGCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 6175 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 || || || || || | ||| ||||| ||||| || |||||||| Sbjct 6176 ACATAGAATTGGCAAAGGGTATGGCATGGAGGTAGGGCCATGAG 6219 >seq13093 Length=55778 Score = 113 bits (124), Expect = 4e-20 Identities = 198/286 (69%), Gaps = 3/286 (1%) Strand=Plus/Minus Query 29800 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 29859 |||||| |||| ||||| ||| | | ||| || | | || | ||| ||||| || Sbjct 52603 TTCAGCAGTTCAGTGTGATTCAGAAAAATGTGTGCCTATGTCAAAGAGTGTACAAAGTCA 52544 Query 29860 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 29919 || || | || | ||||| ||| || |||||||| | || || ||||| |||| || Sbjct 52543 CCTGGCTTCAGGC-GGTGATGTGTGCAATCATGTAGG--AGCAGGGAGTATTTGGCAGTG 52487 Query 29920 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCT 29979 || ||||| || || || |||||||| | ||||||||||| ||||| || || ||||| Sbjct 52486 TTGAAGGGCACACCCAGGCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCA 52427 Query 29980 CCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAG 30039 | || |||| || ||| | || || ||| |||| || |||||| | || Sbjct 52426 CTGTTCATCACATATTGCTGGAGAAGGGCATGACACAGAGGTAGGGCCATGCGAGGAAAA 52367 Query 30040 TCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGT 30085 ||||| || |||| | |||| |||||| | ||||| || |||| Sbjct 52366 TCTTTTGGAGTCCAAGAACACAGGATGATTCTTCTGTCATCAGGGT 52321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407952577154474