Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq110334 93.3 3e-14 seq14100 93.3 3e-14 >seq110334 Length=45663 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| |||| ||| || || |||||| ||||| ||||||||||| Sbjct 17301 CCACCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 17360 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||| |||||| || ||||| || || | ||| || |||| ||| Sbjct 17361 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 17420 Query 48660 ACGCCCTCCTTGTC 48673 | ||||||||| || Sbjct 17421 ATGCCCTCCTTATC 17434 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| |||| ||| || || |||||| ||||| ||||||||||| Sbjct 17529 CCACCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 17588 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||| |||||| || ||||| || || | ||| || |||| ||| Sbjct 17589 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 17648 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| ||||| || ||||| || ||| | | | || | ||||||| Sbjct 17649 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACC 17708 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || |||| || || || || || ||||| Sbjct 17709 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 17755 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| | || | |||| || || || |||||| ||||| ||||||||||| Sbjct 17072 GCCACCCCTCAAACGTAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGA 17131 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || | || |||| |||||| || ||||| || || | ||| || |||| ||| Sbjct 17132 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGG 17191 Query 48659 AACGCCCTCCTTGTC 48673 | ||||||||| || Sbjct 17192 GATGCCCTCCTTATC 17206 >seq14100 Length=29382 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| |||| ||| || || |||||| ||||| ||||||||||| Sbjct 9890 CCACCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 9831 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||| |||||| || ||||| || || | ||| || |||| ||| Sbjct 9830 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 9771 Query 48660 ACGCCCTCCTTGTC 48673 | ||||||||| || Sbjct 9770 ATGCCCTCCTTATC 9757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380317626198774