Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq57734 152 6e-31 seq14071 152 6e-31 seq34038 131 2e-24 seq102827 127 2e-23 seq34347 91.5 2e-12 >seq57734 Length=26652 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 20970 GCTTGGCCAGCTCGCCCGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 20911 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 20910 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 20851 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || || || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 20850 TGTCATTAACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 20791 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20790 GCACCTGCTTGAGCACCTTGTA 20769 >seq14071 Length=1824 Score = 152 bits (168), Expect = 6e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 742 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 683 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 682 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 623 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||||||||||||| ||| | ||| ||||||||| |||||||| Sbjct 622 TGTCAGTGACAAACGAGTTCATGATGCTCATGGCTTTGGACGAGATGCCCGTGTCGGGGT 563 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||||||| | |||||| Sbjct 562 GCACCTGCTTCAGCACCTTGTAGATGTAAATCGAGTA 526 >seq34038 Length=5881 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||||||| ||||||||||| || | || Sbjct 4364 GCTTGGCCAGCTCACCAGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 4423 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||||||| ||||||| | ||||||| || | | Sbjct 4424 TGGTCGAGCGCTTGTTGTAATGCGCCAGACGGGAGGCCTCGCCGGCGATGCGCTCAAAGA 4483 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||| || |||||| | Sbjct 4484 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATACCAGTGTCGGGAT 4543 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | || ||||| Sbjct 4544 GAACCTGCTTCAAGACTTTGTA 4565 >seq102827 Length=3619 Score = 127 bits (140), Expect = 2e-23 Identities = 150/201 (75%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 1338 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 1279 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 1278 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGA--A 1221 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 || ||| | ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1220 GGTA-TTGGCGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 1162 Query 1254523 GCACCTGCTTGAGCACCTTGT 1254543 |||||||||| |||||||||| Sbjct 1161 GCACCTGCTTCAGCACCTTGT 1141 >seq34347 Length=52893 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| ||| || |||||| |||| ||||| Sbjct 39924 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 39865 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || |||||||| ||||||||||| || ||||| Sbjct 39864 ATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACCTTCAATATCAA 39815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6096180446361546