Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq110334 113 3e-20 seq64190 107 1e-18 seq38557 107 1e-18 seq1098 100 2e-16 seq39705 95.1 9e-15 seq43874 93.3 3e-14 >seq110334 Length=45663 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||||||| || |||| || || || || ||||| |||||||| ||||| | | Sbjct 17073 CCACCCCTCAAACGTAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 17132 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||| ||| | || | || ||||| ||||| || Sbjct 17133 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 17192 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| || || || | || || ||| | || | |||||| |||| ||| Sbjct 17193 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACT 17252 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | ||| || || || |||||||| Sbjct 17253 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 17299 >seq64190 Length=38817 Score = 107 bits (118), Expect = 1e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| ||||| | ||||||||||| || || | | ||| || ||| || ||||| Sbjct 9525 ATGAAGAGTGGACTTCTTTTGAATGTTGTAGTCAGACAAGGTACGTCCATCTTCCAGTTG 9466 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||||||| | ||||||||||||||||| || ||||| || || || || || | || Sbjct 9465 CTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 9406 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| |||||| || | ||| ||| | || ||| | ||||| || | | Sbjct 9405 GGCCTTTACATTTTCTATTGTAACTGAAGCTTCAATCTCGAGAATGATAGTCTTCTCCAT 9346 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||| || || |||||||| || Sbjct 9345 AAGGGTTTTCACGAAAATCTGCATCTT 9319 >seq38557 Length=84320 Score = 107 bits (118), Expect = 1e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATT-CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAAT 29632 || ||| | |||||| ||||||| | ||||||||||| || || | | ||| || || Sbjct 72191 CAACACAAGATGAAGAGTGGATTTCCTTTTGAATGTTGTAGTCAGACAAGGTACGTCCAT 72250 Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692 | || | ||| ||| ||||| | |||| |||||||||||| || ||||| || || || | Sbjct 72251 CTTCCACTTGCTTGTCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 72310 Query 29693 CTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 | | | || || ||| ||||||| || | | |||| || | ||||| | | Sbjct 72311 CCTAGATCTTGGCCTTTACATTTTCTACTGTAACCAAGGGTTCAACCTTGAGAGTAAAGG 72370 Query 29753 TTTTGCCAGTTAA-GGTTTTAACAAATATCTGCATTTT 29789 | || || ||||| |||||| ||||| |||||||| || Sbjct 72371 TCTTCCCCGTTAAGGGTTTTCACAAAAATCTGCATCTT 72408 >seq1098 Length=22631 Score = 100 bits (110), Expect = 2e-16 Identities = 152/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| ||||| || ||||||||| | ||||| | | ||| | ||| || Sbjct 2745 CACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAATCAGACAAGGTATGTCCATCTTC 2686 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| ||||||||| | |||| ||||||||||| || ||||| || || || || || Sbjct 2685 CAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATGAGGAGGAATTCCTTCCTTATCCTG 2626 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | || || | | ||||| || || || |||| || | ||||| || || || Sbjct 2625 GATCTTGGCCTTTATATCTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTAATGGTCTT 2566 Query 29757 GCCAGTTAA-GGTTTTAACAAATATCTGCATTTTA 29790 || |||| |||||| || || |||||| | ||| Sbjct 2565 CCCTCTTAAGGGTTTTCACGAAAATCTGCGTCTTA 2531 >seq39705 Length=33086 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || ||||| ||||| || || ||||| || | | |||| || Sbjct 4010 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCAGCCATTC 4069 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || |||||||| ||| | |||| | |||||||| || || || |||||||||||| Sbjct 4070 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 4129 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||||| |||| | |||||| | | || || || || || | Sbjct 4130 TGGATTTTAGCTTTGATGTTTTCAATGGTGTCACTGGGCTGGACCTCGAGTGTGATGATC 4189 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||| || ||||| |||||||| Sbjct 4190 TTGCCCATTGGGGTCTTCACAAAGATCTGCAT 4221 >seq43874 Length=6976 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| || || |||| || || ||||| ||||| || ||||| || || | Sbjct 1091 CCTCCCCTCAAGCGAAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1032 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || || |||||| | |||| || ||||| || || || Sbjct 1031 AGGGTACGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 972 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| |||||||| ||| || | || || | || | ||||| | || || Sbjct 971 ATGCCCTCCTTGTCTTG-AATCTTGGCCTTAACGTTCTCGATGGTGTCGCTGGGCTCCAC 913 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || | ||| || || || |||||||| Sbjct 912 CTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384592257918858