Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq86643 232 8e-56 seq19963 176 5e-39 seq106247 125 8e-24 >seq86643 Length=41175 Score = 232 bits (256), Expect = 8e-56 Identities = 613/932 (66%), Gaps = 17/932 (2%) Strand=Plus/Plus Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118 ||| || ||||||| || | ||| || | ||| |||| || || | ||| || Sbjct 8166 CCAAGGCTTTATGTCTCAGGTGCTCATCCAAACATTGGATGGCAAAGAGGTCGATATCTG 8225 Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178 || ||||| || || |||| ||| ||| || | || |||||||| | || || | Sbjct 8226 TGTCAAACTTATTGGCAAACAAGTGGTGC---TTGTGCAGCATCCAATTCAAGTCACCTG 8282 Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238 ||| || || |||||||| || || || || || |||| || || || |||| || | Sbjct 8283 CTCCAAAAACACACACGGAGCGTACATGGACACCATTGCAGGGTGGGTAGGGGGCGCCTT 8342 Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298 | ||||| || || |||| |||||||| || ||||||| || || |||||||||| Sbjct 8343 TGGAAACATCACCTTCAAAGTACTGCCACTTGACAAACCTAGCAATTGCATGCATGTCGG 8402 Query 162299 AGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358 | |||| ||||| | | | |||| | || || || | || | ||||| | || Sbjct 8403 ACATGTCATACTTATTGCTTAAGGGCAGTGAGCCTGGGACTTCAGGGATCCTCTGAATAG 8462 Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418 | ||||| || | || ||||| || || || || || | ||||||||| |||| || Sbjct 8463 TGGCCCAGAGATACTCATCTGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGGA 8522 Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478 ||| || | ||| | || || || ||| | || | || || || || | Sbjct 8523 TTCTTTCATTCTCTAGCACATACTCCACATAATTCCTACTGACCACGAAATAGGCACTGC 8582 Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCA 162538 | ||||||| ||| | | ||| ||| || |||||| |||||||| | | Sbjct 8583 CTGAAAACAGAGGTGTTTCAAGAGGGGGGTGCATTTTGTCAGTCCCCGTGTTTGTCAGCT 8642 Query 162539 TTCCCTCTACGACCACGTGTCT----CTTCCTCCACCTGGCCATCTTACTGGTAGACGGG 162594 |||| | || | ||| | ||| |||| || | | ||| ||| | | Sbjct 8643 TTCCATTAACAAT----TGTATAATGCTTTTTCCATCTTTCTTTTTTATTGGATGGCATT 8698 Query 162595 TGTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGA 162654 || || ||||| |||| ||| || | ||| || | | || || || || Sbjct 8699 CTCTCAGTTTCTAGGTTGTTTTCTCCCATTAATGACTTGAGTTTCCTGACAATTTCCAGG 8758 Query 162655 TTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTG 162714 ||||| |||| ||||| || | || || ||||| || | || ||||| | | || Sbjct 8759 TTGGTTTTAATAGGAAAATCCATACCACAAAGATTTATCAAGTACTTCCAGTCTGCACTC 8818 Query 162715 AGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTAC 162774 | || ||| || ||||| | |||||| || ||||||||||| |||||||| || || || Sbjct 8819 ATTCTGTAGAGGTCCTGCATACAGTTGAGGTCGGCCTGGACCCGACTCCATGATGCATAT 8878 Query 162775 ACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATC 162834 || || ||||||| | | |||| |||||||| || | |||||| || | || || ||| Sbjct 8879 ACCACACTCTCCAGCTGACTGGCCACAAAGACGTTATTGAAACAGGATGCAATGCCAATC 8938 Query 162835 ACGGCCAGTGAGAA---CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTC 162891 || | ||| | || ||| || | ||| | || || || | ||| || | |||| Sbjct 8939 ACCG-CAGCCAAAAAGGAATC--CTCTGATTTTTTGTCCACATGAATGCAATAGAAATTC 8995 Query 162892 TGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACG 162951 ||||| |||||||||||||| | || || | ||| || || || || || ||||| Sbjct 8996 TGAGGCATATAGATGGCCCTCAGGAGCCTGTCAAGCATTTCGATTTTGTGATGAACCACT 9055 Query 162952 ATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983 || ||||| ||||| || ||||| ||||| || Sbjct 9056 ATGGAATATGCTATTGGAAACTCTGCCTCTTC 9087 >seq19963 Length=71002 Score = 176 bits (194), Expect = 5e-39 Identities = 232/322 (72%), Gaps = 0/322 (0%) Strand=Plus/Minus Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830 || |||| || || |||| | || || ||||| || || ||||||||||| || | | Sbjct 23984 CAAAGAGGGTGAGGCAGGCTATTCCTGAGATTTTCCCAGAACCAAAAGTATTGAAAAGGC 23925 Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890 || | | || || || || |||| ||| || ||||| || || | || || | || Sbjct 23924 ACTTGTAGCATCCCTCATCATCCAAGGTAGTATTCCAGAAGGTAATGGTTGAGCTCTGGA 23865 Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950 |||| || | || ||||| | | ||||| || | || |||||| ||||| || || | Sbjct 23864 GTCCCAGCTCAGTGATGTTTATCTTATCCTTATAGGCAGCCTGGACCACAACCCCATGGT 23805 Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010 ||| |||||| || ||||||||||| ||||| || || || |||||||| || || | Sbjct 23804 TCTTGCTGAAGGTAGCCATGTTTTCTGGGCTTACGGCTTTGATTTTCTGCCATGTCACAA 23745 Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070 | |||||||| | | ||| |||||||||| ||| |||||||||||||||| | | Sbjct 23744 TCAAAACTTCATGGGAAGTTCCCAGAGAGCATCGTAAGGAAGCAGGTGTGTTCAGCAGCT 23685 Query 172071 CCCTTTCGTCTTGCGTTACCAC 172092 | ||||| ||||| || ||||| Sbjct 23684 CTCTTTCATCTTGGGTCACCAC 23663 Score = 140 bits (154), Expect = 4e-28 Identities = 182/250 (73%), Gaps = 9/250 (4%) Strand=Plus/Minus Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562 |||||||| |||| ||| || |||||||||| ||| | || | ||| |||||||||| Sbjct 26593 ACAGTTTGCCTGAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCT-- 26536 Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622 | |||||||||||||| || || || || || || || || || |||||||||||||| Sbjct 26535 -TCCCCACTTGACTTTTGGGGTCCTTGACCTGGAGGATACTGGTGACAGATGTAGTCCCA 26477 Query 171623 TTACGATGT---AGAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAA 171679 || | ||| |||| | | |||| | || || ||||| || || | || ||||| Sbjct 26476 TTGGGGTGTGAGAGAA---TCTCAGTAGTGTTGTCCATTCCTGACCCAGAGACCTTCCAG 26420 Query 171680 AATATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTAATCCATCTTCGAAG 171739 | || ||||| ||||||| ||| | ||||| ||||| || ||| ||||| ||| Sbjct 26419 GAGATCACAGGGGCTGGTCGGGCATTGGCAGAACAAGTGATACTTAGGTGGTCTTCAAAG 26360 Query 171740 AACTCATAGT 171749 || | ||||| Sbjct 26359 AATTTATAGT 26350 >seq106247 Length=26957 Score = 125 bits (138), Expect = 8e-24 Identities = 373/562 (66%), Gaps = 19/562 (3%) Strand=Plus/Plus Query 176967 TAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAATTTTCGTAATTCTCTCTCGAT 177026 || || | ||| ||||| || | ||| | || | |||||||| || || || || ||| Sbjct 18179 TAATCTTCCACATGAATAAATGAATCTGCTGGAATATAATTTTCATAGTTTTCCCTAGAT 18238 Query 177027 GTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATCGGTAGAGTTTTTCGGTAATA 177086 | || || || | ||||| | || |||| || || |||||| ||||| || || Sbjct 18239 GGCCCCAGAACAACAGGTACAGAGCCAGCCAGAAAAGCGTTGTAGAGCTTTTCTGTGATG 18298 Query 177087 TAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATTTACAGGAAGATA--GTAGCG 177144 || || |||| | ||||| || || | ||||||||||| || | ||||| ||| | Sbjct 18299 TAATCTTTGTGGATCGAGTTTTCGAAGGAAAGATAGAATTTGCAAGTAGATATGGTA--G 18356 Query 177145 GGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTTCCCGTATACATGTATATCTA 177204 | || || | | ||| | ||| ||||| | | | | ||| || ||| || || | Sbjct 18357 GAATTAAATTTTTATCATTCACATATTCTCCAAATGCTTGCCCATAAGTATGGATTTCAA 18416 Query 177205 TGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGTGGTCGTTGTTCCAATTGCTG 177263 || ||| || | ||| ||| || || || || | || || |||||| || || Sbjct 18417 TGCTTTTGCTTAACTCATTGTAATA-CTTGACCCTGGCATGCTCAGGGTTCCAGTTACTT 18475 Query 177264 ACGACCCAGCAAACTAACTTGCTCTTTGC-GGGAACGGGATTC-GATACTAATGCAGTGT 177321 || |||||||| || ||||| |||||||| || || ||| | || |||| || | Sbjct 18476 ACAACCCAGCACACCAACTT-CTCTTTGCTTGGCAC----TTCAAACACGAATG-GGTTT 18529 Query 177322 CT-CTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCGAGTCGCGTCTGTACGTTAAC 177380 | || | ||| | | ||||| ||||| || ||||| ||||| || | || || | Sbjct 18530 GTGCTCACCGTCAAGAAGCCATAAGGCACTTGGATATCTGAGTCACGGCGATAAGTCAGA 18589 Query 177381 GTGAGATTGAAAAGGTTTTCTATAC--CTTGTTTGAAGGGGCTGTTACTGGGCGATTCTA 177438 || || ||||| |||| || |||| || |||| ||| ||| | | || ||||| | Sbjct 18590 GTCAGGTTGAACAGGTGCTCAATACCACTCTTTTG--GGGTGTGTGAGTTGGAGATTCCA 18647 Query 177439 AGTTCATCCATATCCACTTTTGAAAGGTTGGTCTGGGTTCCGTAGGTAGAGTATAAGGAT 177498 | |||||||| ||||| || || || | ||| || | | | ||||| | || ||| Sbjct 18648 AATTCATCCAAATCCATTTCTGGAATGGTGGCCTAGCCTGCTGAGGTAAATTAGTCAGAT 18707 Query 177499 CTATACTTATCTCTCTGTGGTG 177520 | ||| || |||| ||| || Sbjct 18708 CCCAACTGATGTCTCGGTGATG 18729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577466466844800