Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq43874 127 2e-24 seq110334 116 3e-21 seq58024 109 5e-19 seq38557 86.0 6e-12 >seq43874 Length=6976 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| |||| || ||| ||| | || ||||||||||| || ||||| Sbjct 828 CTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAA 769 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 768 GATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 709 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || || || |||| || ||||| Sbjct 708 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTCAGGGTCTTCAC 649 Query 35725 AAATATCTGCATT 35737 ||| ||||||||| Sbjct 648 AAAGATCTGCATT 636 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| |||| || ||| ||| | || ||||||||||| || ||||| Sbjct 1056 CTCTTTCTGGATGTTGTAGTCGGACAGGGTACGCCCATCTTCCAGCTGCTTTCCAGCAAA 997 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || ||||||||| ||||| ||| | | Sbjct 996 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGAATCTTGGCCTTAACGTT 937 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || ||||| |||| || ||||| Sbjct 936 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCAC 877 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 876 GAAGATCTGCAT 865 >seq110334 Length=45663 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 17108 CTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 17167 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||||| || | || |||||| ||| |||||| ||||| | | Sbjct 17168 GATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 17227 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||| |||| ||||| || || || |||| || ||||| Sbjct 17228 CTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 17287 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 17288 GAAGATCTGCAT 17299 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 17336 CTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 17395 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||||| || | || |||||| ||| |||||| ||||| | | Sbjct 17396 GATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 17455 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||| |||| ||||| || || || |||| || ||||| Sbjct 17456 CTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 17515 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 17516 GAAGATCTGCAT 17527 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 17564 CTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 17623 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||||| || | || ||||| ||| |||||| ||||| | | Sbjct 17624 GATGAGCCTCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATT 17683 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 17684 CTCAATGGTGTCACTTGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 17743 Query 35725 AAATATCTGCATTCTG 35740 || || |||||| || Sbjct 17744 GAAGATTTGCATTTTG 17759 >seq58024 Length=30966 Score = 109 bits (120), Expect = 5e-19 Identities = 140/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||| | | | | | ||| || | || ||||||||||| || ||||| Sbjct 24421 CTCTTTCTGGATGTTGCAGTTGAC-AGGGTGCGTCCATCTTCCAGCTGCTTTCCAGCAAA 24479 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | |||| || ||||||||| |||||| ||| | | | Sbjct 24480 GATTAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATT 24539 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| | ||||| ||||| || ||||| Sbjct 24540 CTCGATGGTGTCGCTGGGCTCCACCTCCAAGGTGATGTTCTTACCAGTCAAGGTCTTCAC 24599 Query 35725 AAATATCTGCAT 35736 ||| | |||||| Sbjct 24600 AAAGAGCTGCAT 24611 >seq38557 Length=84320 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTAC-TCTCCTTTTGAATGTTGTAATCGGC 35568 ||||||| | |||||||| | ||| | || | ||||||||||||||||| || | Sbjct 72177 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGATTTCCTTTTGAATGTTGTAGTCAGA 72236 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 |||||| || | || |||| ||||| | ||||| |||| | ||||| || | ||| Sbjct 72237 CAAGGTACGTCCATCTTCCACTTGCTTGTCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 72296 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 || | ||||| ||| |||||| ||| | | || | || || | | ||| || Sbjct 72297 AATTCCTTCCTTATCCTAGATCTTGGCCTTTACATTTTCTACTGTAACCAAGGGTTCAAC 72356 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAA-AGTTTTCACAAATATCTGCAT 35736 || | || | || || ||||| || ||||||||||| |||||||| Sbjct 72357 CTTGAGAGTAAAGGTCTTCCCCGTTAAGGGTTTTCACAAAAATCTGCAT 72405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450041124053040