Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq51126 104 2e-17 seq54776 95.1 1e-14 seq80468 82.4 6e-11 >seq51126 Length=15735 Score = 104 bits (114), Expect = 2e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963 |||||| ||||||||||| | ||||||| || ||||| || || || ||||||||| Sbjct 14195 CGGTTTAGCCAAGAAGTTCAGATCACAGAAGCCCGCTGTTTCTACGGCTTCCAAATTGCC 14136 Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || ||||| || ||||| |||||||| ||||| || || || || ||||| |||||| Sbjct 14135 ATGGAAAACATACATTCTGAAATGTATAGTCTCCTCATTGACACTTACATTAAAGAT 14079 >seq54776 Length=46456 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||||||||| || ||||| |||||||| || ||||| | Sbjct 6372 AAAATCCCTTTGATTTTATGGAAAATATTTCTTTAGAAGGAAAAACAAATTTCTTTGAGA 6431 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| ||| |||||||| Sbjct 6432 AACGAGTTTCAGAGTATCAGCG 6453 >seq80468 Length=16579 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 41094 AATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCG 41153 |||||||| ||||| || || |||| || || |||| |||||||| || || || || Sbjct 6171 AATGGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGCAGACATGGGCCTTGGTGTGCCC 6112 Query 41154 TTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACAC 41198 || ||||| || || || || ||||||| || |||||||||||| Sbjct 6111 TTCAACATCGCCAGCTACGCCTTGCTCACCTACATGATTGCACAC 6067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396809142595690