Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq72 100 3e-16 seq83643 95.1 1e-14 seq51126 86.0 7e-12 >seq72 Length=33347 Score = 100 bits (110), Expect = 3e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 |||||||| ||||||| |||||||||||| ||||||||| ||| || || || || || Sbjct 32933 GTGAAAATATAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGCCGAGTTCCAAACTGA 32874 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 ||| | |||| | | ||| | |||||| ||||||||||| |||||||| || ||| Sbjct 32873 CCAATAGGCTGAAGCAAGTTAATGTTGTTACTTCCCACAAAGTTCTGAGCCAAATTCACA 32814 Query 117425 ATCGT 117429 || || Sbjct 32813 ATAGT 32809 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| || || || | ||| || ||||| |||||||| ||||| ||||||||||| Sbjct 32933 GTGAAAATATAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGCCGAGTTCCAAACTGA 32874 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 ||| |||| || | ||| | |||||| ||||| || |||||||||||||||||| Sbjct 32873 CCAATAGGCTGAAGCAAGTTAATGTTGTTACTTCCCACAAAGTTCTGAGCCAAATTCACA 32814 Query 152149 ATCGT 152153 || || Sbjct 32813 ATAGT 32809 >seq83643 Length=16075 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||||||||||| | || || | |||||||||||| ||||| || |||||||| Sbjct 8170 GTGAAGATGTATCTAGGACTAGCAGAATCCTTGCCACCATGCAGCCTGGTACCAAACTGA 8111 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 ||| ||||| | |||||| || || ||| ||||| ||||||||||||||||| | | Sbjct 8110 CCAATGGGCTGCAAGAGGTTCAGATTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 8051 Query 152149 ATCGT 152153 || || Sbjct 8050 ATGGT 8046 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| ||||| | || || |||| ||||||||||||| || | ||||| || || Sbjct 8170 GTGAAGATGTATCTAGGACTAGCAGAATCCTTGCCACCATGCAGCCTGGTACCAAACTGA 8111 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 ||| | |||| |||||||||||| || ||| |||||||| || |||||||| |||| | Sbjct 8110 CCAATGGGCTGCAAGAGGTTCAGATTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 8051 Query 117425 ATCGT 117429 || || Sbjct 8050 ATGGT 8046 >seq51126 Length=15735 Score = 86.0 bits (94), Expect = 7e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831 ||||||||||| || | |||||| ||||| | ||||| ||||| ||||| || ||||| Sbjct 13103 TCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCGGGCATCAGTCCCCGTTTCTTG 13162 Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891 | ||| || || | || |||||| |||||||| ||||| ||| ||||| ||| Sbjct 13163 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCG 13222 Query 74892 ACAAGGCGTT 74901 |||| |||| Sbjct 13223 ACAACACGTT 13232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546302573372400