Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq80468 120 2e-22 seq13093 109 4e-19 >seq80468 Length=16579 Score = 120 bits (132), Expect = 2e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||| ||||| | | ||||||||||||||| ||||| Sbjct 6056 AGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAAGGCGTAGCTGGCGATGTTGAAGGGC 6115 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || || |||||||| | ||||||||||| ||||| || || ||||| || | | Sbjct 6116 ACACCAAGGCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 6175 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 || || || || || | || ||||| ||||| || |||||||| Sbjct 6176 ACATAGAATTGGCAAAGGGTATGGCATGGAGGTAGGGCCATGAG 6219 >seq13093 Length=55778 Score = 109 bits (120), Expect = 4e-19 Identities = 169/239 (71%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 29920 GTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGA 29979 ||| ||||| || || || | || | ||||| ||| || |||||||| | || || || Sbjct 52556 GTGTACAAAGTCACCTGGCTTCAGGC-GGTGATGTGTGCAATCATGTAGG--AGCAGGGA 52500 Query 29980 GTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTG 30039 ||| |||| |||| ||||| || || || |||||||| | ||||||||||| ||||| Sbjct 52499 GTATTTGGCAGTGTTGAAGGGCACACCCAGGCCCATGTCTGCTGACCTCTGGTACAGCTG 52440 Query 30040 ACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGC 30099 || || ||||| | || |||| || ||| | ||| || ||| |||| || || Sbjct 52439 GCAGGACAGCTCACTGTTCATCACATATTGCTGGAGAAGGGCATGACACAGAGGTAGGGC 52380 Query 30100 CATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGT 30158 |||| | || ||||| || |||| | |||| |||||| | ||||| || |||| Sbjct 52379 CATGCGAGGAAAATCTTTTGGAGTCCAAGAACACAGGATGATTCTTCTGTCATCAGGGT 52321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405649132109496