Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq110334 127 2e-24 seq43874 100 2e-16 seq39705 91.5 1e-13 >seq110334 Length=45663 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || ||||||||||| Sbjct 17527 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 17468 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || || || || ||||| || || || || Sbjct 17467 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAG 17408 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| ||||||||| Sbjct 17407 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 17348 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||||||| | ||| |||| ||||| || ||||||| || Sbjct 17347 ATTCAGAAAGAGTCGACCCTGCATCTGGTCCTGCGTCTGAGGGGTGGTAT 17298 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || ||||||||||| Sbjct 17299 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 17240 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || || || || ||||| || || || || Sbjct 17239 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAG 17180 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| ||||||||| Sbjct 17179 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 17120 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||| || ||||||||| | || |||| | |||||| |||||||| Sbjct 17119 ATTCAGAAAGAGTCGACCCTGCACCTGGTCCTACGTTTGAGGGGTGGC 17072 Score = 122 bits (134), Expect = 8e-23 Identities = 179/252 (71%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 26971 TTTTTAA--TTTATACGCCA---TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTAT 27025 ||||||| |||||| | || |||| || || || || || |||||||||||| | || Sbjct 17777 TTTTTAAATTTTATAGGTCAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCAT 17718 Query 27026 TACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAA 27085 || || || ||||| || ||| | ||||||| || || || || || || || Sbjct 17717 CACCCTGGAGGTGGAGCCAAGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAA 17658 Query 27086 AGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAG 27145 |||||||| || || || || ||| | | || | || ||||| || ||||||| | Sbjct 17657 GGAAGGCATCCCCCCGGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGG 17598 Query 27146 TTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTT 27205 || |||| |||||||||||||| || ||||||||| | ||| |||| ||||| | Sbjct 17597 CCGCACTCTTTCTGATTACAACATTCAGAAAGAGTCGACCCTGCATCTGGTCCTGCGTCT 17538 Query 27206 GCGGGGTGGCAT 27217 | ||||||| || Sbjct 17537 GAGGGGTGGTAT 17526 >seq43874 Length=6976 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||||||| ||| | || || || || ||||| || Sbjct 864 CATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 923 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || |||| || || || ||||||||||| || ||||| || || || || Sbjct 924 CGACACCATCGAGAACGTTAAGGCCAAGATTCAAGACAAGGAGGGCATCCCCCCTGACCA 983 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || || || || ||||||| | ||| | ||||| ||||| Sbjct 984 GCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGTACCCTGTCCGACTACAA 1043 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || || ||||| ||| | || |||| | || ||| |||| || Sbjct 1044 CATCCAGAAAGAGTCCACCCTGCACCTGGTCCTTCGCTTGAGGGGAGG 1091 >seq39705 Length=33086 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || | | |||||| || || || || || | || Sbjct 4221 ATGCAGATCTTTGTGAAGACCCCAATGGGCAAGATCATCACACTCGAGGTCCAGCCCAGT 4162 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct 4161 GACACCATTGAAAACATCAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 4102 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || |||||||| |||| | | | || | || || || || Sbjct 4101 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGAATGGCTGCACTCTCTCAGACTATAAT 4042 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| ||| | || ||||| | | ||||| ||||||| Sbjct 4041 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTATGAATGCGGAGTGGCAT 3992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434192423333760