Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq19963 223 3e-53 seq80468 113 4e-20 seq54929 113 4e-20 >seq19963 Length=71002 Score = 223 bits (246), Expect = 3e-53 Identities = 201/253 (79%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 1278 CAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAAAACATGGCC 1337 || |||||| | ||||| |||||||| ||| | ||||| |||||||||||||||||| Sbjct 23732 CATGAAGTTTTGATTGTGACATGGCAGAAAATCAAAGCCGTAAGCCCAGAAAACATGGCT 23791 Query 1338 ACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAAATGAACATA 1397 || || || || |||| |||||||| || ||| | || || || ||||| || ||||| Sbjct 23792 ACCTTCAGCAAGAACCATGGGGTTGTGGTCCAGGCTGCCTATAAGGATAAGATAAACATC 23851 Query 1398 ACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATTGGATGATGAA 1457 |||||||| ||||| || | | |||| || ||||||||||| || || ||||||||||| Sbjct 23852 ACTGAGCTGGGACTCCAGAGCTCAACCATTACCTTCTGGAATACTACCTTGGATGATGAG 23911 Query 1458 GGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGAATAGGGTGT 1517 || ||||||||||| | || || |||||||| |||||||| || |||||||||| || Sbjct 23912 GGATGCTACAAGTGCCTTTTCAATACTTTTGGTTCTGGGAAAATCTCAGGAATAGCCTGC 23971 Query 1518 CTAACCCTTTTTG 1530 || ||||| |||| Sbjct 23972 CTCACCCTCTTTG 23984 >seq80468 Length=16579 Score = 113 bits (124), Expect = 4e-20 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || ||||| | ||| ||||||||||| || | ||| ||||||||| | || || || Sbjct 6056 AGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAAGGCGTAGCTGGCGATGTTGAAGGGC 6115 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||| || |||||||||||||| |||||||||| ||||| || ||||| || || | Sbjct 6116 ACACCAAGGCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 6175 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATG 118695 ||||| || || | | | | || |||||||| || ||||| Sbjct 6176 ACATAGAATTGGCAAAGGGTATGGCATGGAGGTAGGGCCATG 6217 >seq54929 Length=28778 Score = 113 bits (124), Expect = 4e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||| ||| | |||||||| ||||||||| | ||||| || ||||||||| Sbjct 158 GTGGTGGAGGAGCTTTTCAGGGATGGGGTGAACTGGGGGAGGATTGTGGCCTTCTTTGAG 217 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || ||||| || ||||||||||| |||||||| | | || | |||| || |||| | Sbjct 218 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAGC 277 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || ||| ||||||||| || Sbjct 278 ATCGCCCTGTGGATGACCGA 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413802241339432