Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq98832 93.3 3e-14 seq64190 91.5 1e-13 seq110334 89.7 3e-13 seq1098 89.7 3e-13 seq39705 86.0 4e-12 >seq98832 Length=8113 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||| ||||| || ||||| || || || || ||||| ||||| || | | || Sbjct 7804 ATGCAGACCTTCGTGAAGACCCTGACAGGCAAGACCATCACACTCGAGGTCCAGTTCAGT 7863 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || || ||| | |||| | | ||||| || || | || || | || Sbjct 7864 GACACCATTGACAACATCAAAGCTAAAATTCGA-GACAAGGAGGGCATCCCACCTGGCCA 7922 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || |||||| ||||||| ||||| || | ||||||| | ||||| Sbjct 7923 GCAGCGTCTGATTTTTGCCTGCAAACAGCTGGAGGATGGCTGCACTTTCTCAGCCTACAA 7982 Query 23790 CATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 7983 TATCCAGAAAGAGTCCAC 8000 >seq64190 Length=38817 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| |||||||| | || || || |||| |||||| |||| | Sbjct 9319 AAGATGCAGATTTTCGTGAAAACCCTTATGGAGAAGACTATCATTCTCGAGATTGAAGCT 9378 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | | || | |||| |||| || || || || ||||| | || || ||| Sbjct 9379 TCAGTTACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 9438 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || || ||||| ||||| ||||||||||| | ||| || || || ||| Sbjct 9439 CAGCAAAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACCTTGTCTGACTAC 9498 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| ||||| ||||||| Sbjct 9499 AACATTCAAAAGAAGTCCAC 9518 >seq110334 Length=45663 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| || ||||| || ||| Sbjct 17299 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 17240 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | || || || || | || || || || Sbjct 17239 GACACCATTGAGAATGTGAAGGCCAAGA-TCCAGGATAAGGAGGGCATCCCCCCGGACCA 17181 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| ||||| || |||||||| | |||||| | |||||||| Sbjct 17180 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 17121 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 17120 CATTCAGAAAGAGTCGAC 17103 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| || ||||| || ||| Sbjct 17527 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 17468 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | || || || || | || || || || Sbjct 17467 GACACCATTGAGAATGTGAAGGCCAAGA-TCCAGGATAAGGAGGGCATCCCCCCGGACCA 17409 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| ||||| || |||||||| | |||||| | |||||||| Sbjct 17408 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 17349 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 17348 CATTCAGAAAGAGTCGAC 17331 Score = 86.0 bits (94), Expect = 4e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| || ||||| || ||||| || || || || ||||| || || || || | Sbjct 17758 AAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCA 17699 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||| ||| | || | || | | || || ||||| | || || || Sbjct 17698 AGTGACACCATTGAGAATGTGAAGGCCAAGA-TCCAGGATAAGGAAGGCATCCCCCCGGA 17640 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | | || ||||| ||||| || |||||||| | |||||| | ||||| Sbjct 17639 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTA 17580 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || |||||||| || Sbjct 17579 CAACATTCAGAAAGAGTCGAC 17559 >seq1098 Length=22631 Score = 89.7 bits (98), Expect = 3e-13 Identities = 144/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACG-GGAAAAACGATCACTCTCGAAGTTGACT 23665 ||| | |||||||||||| |||||||| | | || || || || |||||| | ||||| Sbjct 2531 TAAGACGCAGATTTTCGTGAAAACCCTTAAGAGGGAAGACCATTACTCTCAAGGTTGAAC 2590 Query 23666 CCACGGACACTGTTGAA-ATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724 || |||| || | ||| |||| || | || | | || || ||||| | || || Sbjct 2591 CCTCGGATACAATAGAAGATATAAAGGCCAAGA-TCCAGGATAAGGAAGGAATTCCTCCT 2649 Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784 |||| || | | || ||||| ||||| ||||||||||| | || || || ||| Sbjct 2650 CATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATACCTTGTCTGAT 2709 Query 23785 TACAACATACAAAAAGAGTCCAC 23807 |||| ||| ||||| |||||||| Sbjct 2710 TACAGCATTCAAAAGGAGTCCAC 2732 >seq39705 Length=33086 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||| | ||| || | ||||| ||||| || | ||| Sbjct 4221 ATGCAGATCTTTGTGAAGACCCCAATGGGCAAGATCATCACACTCGAGGTCCAGCCCAGT 4162 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| | ||| ||||| |||||||| || | || || ||||| Sbjct 4161 GACACCATTGAAAACATCAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 4102 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| |||||||| ||||| | | ||||| | || || || Sbjct 4101 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGAATGGCTGCACTCTCTCAGACTATAAT 4042 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 4041 ATCCAGAAAGAGTCCAC 4025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337459491277304