Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq80468 120 2e-22 seq13093 109 4e-19 >seq80468 Length=16579 Score = 120 bits (132), Expect = 2e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| ||||| | | ||||||||||||||| ||||| Sbjct 6056 AGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAAGGCGTAGCTGGCGATGTTGAAGGGC 6115 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || |||||||| | ||||||||||| ||||| || || ||||| |||| Sbjct 6116 ACACCAAGGCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 6175 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 || || || || || | || ||||| ||||| || |||||||| Sbjct 6176 ACATAGAATTGGCAAAGGGTATGGCATGGAGGTAGGGCCATGAG 6219 >seq13093 Length=55778 Score = 109 bits (120), Expect = 4e-19 Identities = 197/286 (69%), Gaps = 3/286 (1%) Strand=Plus/Minus Query 27139 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 27198 |||||| |||| ||||| ||| | | ||| || | | || | ||| ||||| || Sbjct 52603 TTCAGCAGTTCAGTGTGATTCAGAAAAATGTGTGCCTATGTCAAAGAGTGTACAAAGTCA 52544 Query 27199 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 27258 || || | || | ||||| ||| || |||||||| | || || ||||| |||| || Sbjct 52543 CCTGGCTTCAGGC-GGTGATGTGTGCAATCATGTAGG--AGCAGGGAGTATTTGGCAGTG 52487 Query 27259 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCT 27318 || ||||| || || || |||||||| | ||||||||||| ||||| || || ||||| Sbjct 52486 TTGAAGGGCACACCCAGGCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCA 52427 Query 27319 CCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAG 27378 | | | || || ||| | ||| || ||| |||| || |||||| | || Sbjct 52426 CTGTTCATCACATATTGCTGGAGAAGGGCATGACACAGAGGTAGGGCCATGCGAGGAAAA 52367 Query 27379 TCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGT 27424 ||||| || |||| | |||| |||||| | ||||| || |||| Sbjct 52366 TCTTTTGGAGTCCAAGAACACAGGATGATTCTTCTGTCATCAGGGT 52321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368905829110478