Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq100590 136 5e-27 seq51126 118 1e-21 seq54776 86.0 9e-12 >seq100590 Length=39123 Score = 136 bits (150), Expect = 5e-27 Identities = 110/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| |||||||| || || |||||||||||||| | || Sbjct 31634 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATATGGTTCAATGGAC 31575 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| ||||| | ||| |||||||| |||||||| |||||||| || | | ||||||| Sbjct 31574 TCATTATTTCCAAGAATCTGAGCAGTTGAAGCAGTAGGCATAGGGGCAATAAGTAAACTA 31515 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 31514 TTTCTTATACCAT 31502 Score = 127 bits (140), Expect = 3e-24 Identities = 133/175 (76%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 78739 CATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTA 78798 || |||| || | ||| |||||||| ||||| | ||||| ||||| || ||||| || | Sbjct 5320 CACCACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCA 5261 Query 78799 GAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATAT 78858 |||| ||||| || || || | ||||| | || || ||| |||| || || ||| ||| Sbjct 5260 GAATGGCATAGTCTGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTAT 5201 Query 78859 CTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGAT 78913 ||| || | ||||||||||||| | |||| ||||| || |||||||||| ||| Sbjct 5200 CTAGTTCCACAGTTGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGGTGAT 5146 Score = 107 bits (118), Expect = 3e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||| || ||||| || | || ||||| ||||| |||||||| | |||||||| || || Sbjct 9492 AGTACCAGCATTGAAAAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTT 9433 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 ||| ||||||||||| | || || || || |||||| || || | ||| | |||||| Sbjct 9432 GTACGTTTCAATAGCAGCATCAATATCTTCTTCATGAATCCCCACAGATACCCTCATCAA 9373 Query 78518 CATATGCTGAGGTCTTTCAACC 78539 |||||| || ||||||||| || Sbjct 9372 CATATGTTGTGGTCTTTCAGCC 9351 Score = 107 bits (118), Expect = 3e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| ||| || || | || | ||| Sbjct 16082 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAAAAAAGGTCCCTGGCACGCTGT 16023 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| |||||||| | ||||| ||||||| || Sbjct 16022 TCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATATCTAAATGCCAAGGC 15963 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151 || || || || || | | |||||||| Sbjct 15962 TCCAGGTAAATAGCAAATGCCCCAGGTCG 15934 >seq51126 Length=15735 Score = 118 bits (130), Expect = 1e-21 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| || ||||| ||||| |||||||| ||||| ||||| ||| Sbjct 13103 TCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCGGGCATCAGTCCCCGTTTCTTG 13162 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284 ||||| ||||| | || ||||| ||||||||||| || ||||| || || ||||| ||| Sbjct 13163 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCG 13222 Score = 107 bits (118), Expect = 3e-18 Identities = 112/145 (77%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 47789 GGTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTC 47844 ||||| |||| ||||| |||| || | |||| ||| ||| | || ||||| |||| Sbjct 11661 GGTTCATTTAGAAGTCGGCATCCAAGGTAAAAGAATTCTCTGTTGGACCTGACATCACTC 11720 Query 47845 CCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATA 47904 |||| || ||||| || ||||| | |||||| || || |||||||| ||||||| ||| | Sbjct 11721 CCATCTTCTGATACTCGCCCACTCTTTTCTCAAAGAAGTTAGTTTTCCCTTCCAGTGAAA 11780 Query 47905 TATTTTCCATAAAATCAAATGGATT 47929 | || ||||| || ||||||||||| Sbjct 11781 TGTTCTCCATGAAGTCAAATGGATT 11805 Score = 95.1 bits (104), Expect = 2e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 48391 TTTCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450 |||| ||| |||||||| |||||| || || | |||||||||||||| || || || | Sbjct 14069 TTTCCTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGT 14128 Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505 |||| || || || || || ||||| ||||| | |||||||||||||| || || Sbjct 14129 TTTCCATGGCAATTTGGAAGCCGTAGAAACAGCGGGCTTCTGTGATCTGAACTTC 14183 >seq54776 Length=46456 Score = 86.0 bits (94), Expect = 9e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 47865 ACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAAT 47924 || |||||||| || ||||| ||||| ||||| || || |||||||||||||||||||| Sbjct 6438 ACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATATTTTCCATAAAATCAAAG 6379 Query 47925 GGATTAACTGCATTATAAAT 47944 ||||| |||||| | |||| Sbjct 6378 GGATTTTCTGCATGAAAAAT 6359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693509241472320