Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq100590 141 1e-28 seq51126 116 5e-21 seq5109 84.2 3e-11 >seq100590 Length=39123 Score = 141 bits (156), Expect = 1e-28 Identities = 111/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| |||||||| || || |||||||||||||| | || Sbjct 31634 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATATGGTTCAATGGAC 31575 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| ||||| | ||| ||||||||||||||||| |||||||| || | | ||||||| Sbjct 31574 TCATTATTTCCAAGAATCTGAGCAGTTGAAGCAGTAGGCATAGGGGCAATAAGTAAACTA 31515 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 31514 TTTCTTATACCAT 31502 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| || ||||| || | || ||||| ||||| || ||||| | |||||||| || || Sbjct 9492 AGTACCAGCATTGAAAAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTT 9433 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||| ||||||||| | || || ||||| || |||||| || |||| || | |||||| Sbjct 9432 GTACGTTTCAATAGCAGCATCAATATCTTCTTCATGAATCCCCACAGATACCCTCATCAA 9373 Query 77113 CATATGCTGAGGTCGTTC 77130 |||||| || |||| ||| Sbjct 9372 CATATGTTGTGGTCTTTC 9355 Score = 87.8 bits (96), Expect = 3e-12 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT- 76044 || || || || || || || || || || |||||||| ||||| || || | |||||| Sbjct 20671 GCCAGATCACAGCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTC 20612 Query 76045 AAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAG 76104 || | || | || || |||| ||||||||||| | |||||||| |||||||| || Sbjct 20611 AATAACTGG-GCCTCTGGACTCTCAAAAGGATATCTCATCAGAATAAAAGCATCTGCCAG 20553 Query 76105 TCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 || || || ||||| ||||| || | ||| | ||||| || Sbjct 20552 ACCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGA 20511 Score = 86.0 bits (94), Expect = 9e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| ||||||||||| ||||||| ||||||||| ||||| ||||||||||| ||| Sbjct 16536 TCAAATTCTTCTCCCCAAACTTCATCCAGACCAGGACACTCATTTGGACACATCAAAGAC 16477 Query 76580 CACTC 76584 || || Sbjct 16476 CATTC 16472 >seq51126 Length=15735 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | ||| || ||||| ||||| || ||||| ||||| || || ||| Sbjct 13103 TCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCGGGCATCAGTCCCCGTTTCTTG 13162 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || ||||| ||||||||||| || ||||| ||||| || || ||| Sbjct 13163 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCG 13222 Query 46774 ACAA 46777 |||| Sbjct 13223 ACAA 13226 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949 |||||||| || || || || | |||||||||||||| ||||| |||||||| || || Sbjct 14079 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 14138 Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCT 46995 || || || ||||| ||||| | ||||| || ||||| || ||| Sbjct 14139 AATTTGGAAGCCGTAGAAACAGCGGGCTTCTGTGATCTGAACTTCT 14184 >seq5109 Length=24246 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 ||| ||||| ||||||||||| || |||| ||| | ||||||||| ||||| ||||| | Sbjct 14644 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCGGG 14703 Query 47187 ATATTGGATCGGAAAAATAACAAATC 47212 || ||||| ||||| || ||||||| Sbjct 14704 GTACTGGATTGGAAAGATGACAAATC 14729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711744352076160