Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq67 134 1e-26 seq7 104 2e-17 seq48 84.2 2e-11 >seq67 Length=8586409 Score = 134 bits (148), Expect = 1e-26 Identities = 300/447 (67%), Gaps = 5/447 (1%) Strand=Plus/Plus Query 16949 TGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCG 17008 ||||| |||| || || || || | || || || |||| |||||||||||||||||| Sbjct 7039055 TGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCG 7039114 Query 17009 TTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAAC 17068 || || ||||| | || |||||| ||||| |||||| | ||| |||||| || || Sbjct 7039115 TTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAA 7039174 Query 17069 GACCCAGAAAAGAATATACCCT-CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGT 17127 || ||||||||||| || || | | || | ||||| || | | | ||| | | || Sbjct 7039175 GAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGT 7039234 Query 17128 CGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCAT 17187 | |||| || ||||| | | |||| || || || ||| ||| ||| Sbjct 7039235 GACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCAT 7039294 Query 17188 CGTTTCTATGGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCG 17245 || || |||| || ||| || || | |||||| || | || || || || Sbjct 7039295 GGTCTCAGTGGCATTGAAAAGAAAATCCC--TTTCCTTGGAATCTTTAATGTAAGTGTCA 7039352 Query 17246 ATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAG 17305 ||||| || || |||||||| || ||||||| ||||||| || || || | ||| || Sbjct 7039353 ATGAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAAT 7039412 Query 17306 CATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACG 17365 || |||||||| || |||||||| | | || ||| | | ||||| || || Sbjct 7039413 CAGCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACT 7039472 Query 17366 ATGCCGTCGCTCGCGGCGAAAAACGCC 17392 ||||| ||||| || || || || ||| Sbjct 7039473 ATGCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq7 Length=35612534 Score = 104 bits (114), Expect = 2e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || || || |||||||| ||||||||||| || ||||| ||||||||||||| Sbjct 33435731 GGTCCTTGATGTAGGTGTCGATGAGCAGGCTGTACATCTCCGAGTGGATGTTCTCCATGG 33435790 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 | ||||| || ||||| ||||| ||||| || | || ||||||||| Sbjct 33435791 CGATCTGGAAGCCGTAGAAGCACCGGGCCTCTGTGATCTGAACTTCC 33435837 >seq48 Length=11824846 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 16988 TCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTT 17047 || ||||||||||| ||||| || ||||| || | || |||||| |||| ||||||| Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 17048 AACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGC 17106 ||||| ||||| || || || || || || ||||| || || || || | ||||| || Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3086636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517501679786520