Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq67 143 3e-29 seq48 111 2e-19 >seq67 Length=8586409 Score = 143 bits (158), Expect = 3e-29 Identities = 303/449 (67%), Gaps = 5/449 (1%) Strand=Plus/Plus Query 16185 GGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTT 16244 ||||||| |||| ||| || || |||| || || | || | |||||||||||||||| Sbjct 7039053 GGTGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTT 7039112 Query 16245 CGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAA 16304 ||||||| || || | || ||||| ||||| |||||| | |||||||||| |||| Sbjct 7039113 CGTTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAA 7039172 Query 16305 ATGACCCCGAAAAGAATATACCCT-CAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363 | || || |||||||| || || | |||| | |||||||| | | | ||| | | Sbjct 7039173 AAGAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAG 7039232 Query 16364 GTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCC 16423 || | |||| | ||||| | | |||| || || || || |||| | Sbjct 7039233 GTGACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGC 7039292 Query 16424 ATCGTTTCTATGGCCTT--AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTAT 16481 || || || |||| || ||| || || | |||||| ||| | || || || | Sbjct 7039293 ATGGTCTCAGTGGCATTGAAAAGAAAATCCC--TTTCCTTGGAATCTTTAATGTAAGTGT 7039350 Query 16482 CAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGA 16541 |||| || | ||| |||||||| || ||||||| || |||| || || || | |||| Sbjct 7039351 CAATGAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGA 7039410 Query 16542 AGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCA 16601 | || || || || || || ||||| | || || ||| ||| ||| ||||| | Sbjct 7039411 ATCAGCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTA 7039470 Query 16602 CGATACCGTCACTTGCAGCAAAAAACGCC 16630 | || || || ||||| ||||| || ||| Sbjct 7039471 CTATGCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq48 Length=11824846 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||||||||| ||||| |||||||| || | || ||||| |||| ||||| Sbjct 3086756 CTTCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCT 3086697 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||||||||||||| ||||||||||| || || ||||| || || || |||| ||||| | Sbjct 3086696 TTAACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 3086637 Query 16344 C 16344 | Sbjct 3086636 C 3086636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511371000095480