Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq17 461 5e-125 seq61 203 2e-47 seq6 116 3e-21 >seq17 Length=24042557 Score = 461 bits (510), Expect = 5e-125 Identities = 449/578 (78%), Gaps = 0/578 (0%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || |||| | ||| || |||||||||||||||||||||||||| | ||| Sbjct 9080498 AAAACACCTTCACATTACTCATTTTTTTCATATACTTCAAATTTGTACTTAATGCCTTTT 9080557 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| ||||||||||| ||| || ||| | |||||| |||||||| | | Sbjct 9080558 TCCTCCTGGACATCAGAAAGAACACCTGGGTACTCTGGGAGAAGTTTATATTTCTCCAAA 9080617 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| || || | |||||| || ||||||||||| |||||||| ||| Sbjct 9080618 TCAATTTCTGGAAAAAATGTATCCCTTTCAAATTCCTGCATGATCCTTGTCACAAAAAGT 9080677 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||| || || | ||||| ||||| ||||| || ||||| ||||| | |||||| Sbjct 9080678 CACTGATGGCCGGGCTTGCTCATGGCTTCCTTATAAACGGAACTGCCTCCCACTATCCAA 9080737 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 |||||||| |||||||||| ||| ||||||| || |||||||||| |||||||| | | Sbjct 9080738 ACCATGTCCACTTTATTTGTTAAATCTGGCTCCTCAATAAGTTTTAAGGCATCATCCAGA 9080797 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || || || | ||||||||||| | |||| | ||||| ||||| | |||||||| | | Sbjct 9080798 CTTTTGGCGAGAAAATGAGCTCCTTTTGGAGGTTCCTTGAGTTCTCTACTGAGAACTAAA 9080857 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||| ||| | |||||||||| ||||| | ||||| |||||||| ||||| ||||| Sbjct 9080858 TTAACCCTGTCCTTTAAAGGCCTACTCTTCACGGGAATGGAGAACCAGGTCTTCCTACCC 9080917 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||||||| |||||||||||| || | | |||| || || |||||||||||||||| Sbjct 9080918 ATAATCACCAAATTCTGTTTACCTTCTGCTGAAGTCGTTGTGGTCATTCTTTGGAAATAC 9080977 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 || || |||||| | || |||||||||| || || | |||| ||||||||||| Sbjct 9080978 TTGAATTCATTCCTGAGCGGAGGCCAAGGCAGGTCTCCGTTCTTGCGGATGCCCATGTTC 9081037 Query 4495 TGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 || | ||||| | ||||||||||||| ||||||| Sbjct 9081038 TGGGACACAGCGGCGATGCAGTTTAGTGTACGAACCAT 9081075 >seq61 Length=9801302 Score = 203 bits (224), Expect = 2e-47 Identities = 247/336 (74%), Gaps = 13/336 (4%) Strand=Plus/Plus Query 4199 TGTCTACTTTATTTGCTA--ATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACT 4256 |||||| ||||| | || ||||||| | || |||||||||| |||||||| | ||| Sbjct 1960294 TGTCTA--TTATTAGATAGGATTCTGGTTCCTCAATAAGTTTTAAGGCATCATCCAGACT 1960351 Query 4257 CTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATT 4316 || || | ||||||||||| | |||| | ||||| ||||| | |||||||| | ||| Sbjct 1960352 TTTGGCAAGAAAATGAGCTCCGTTTGGAGGTTCCTTGAGTTCTCTACTGAGAACTAAATT 1960411 Query 4317 AATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCAT 4376 ||| ||| | |||||||||| | |||||| ||||| |||||||| |||| ||||| Sbjct 1960412 AATCCTGTCATTTAAAGGCCAATACTTCTCGGGAATGGAGAACCAGGTCTCCCTACCC-- 1960469 Query 4377 AATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTT 4436 |||||||||||| || | | |||| || || ||||||||||||||| || Sbjct 1960470 -------AAATTCTGTTTACCTTCTGCTAAAGAGGTTGTGATCATTCTTTGGAAATACTT 1960522 Query 4437 AAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTG 4496 || ||||| | ||| || ||||||| || || | |||| ||||||||||| || Sbjct 1960523 GAATTCATTTCTGAGTGAGGGTCAAGGCAGGTCTCCATTCTTGCTGATGCCCATGTTCTG 1960582 Query 4497 AGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 | ||||||| ||||||||||| | ||||||| Sbjct 1960583 GGACACAGCAATGATGCAGTTTAGGGGACGAACCAT 1960618 Score = 100 bits (110), Expect = 2e-16 Identities = 101/131 (77%), Gaps = 3/131 (2%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || |||| | |||||| |||||||||||| ||||||||||||| ||| Sbjct 1959015 AAAACACCTTCACATTACTCATTCTTTTCATATACTTCATATTTGTACTTAATGTCTTTT 1959074 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 ||||| | |||| ||||||||||| ||| || ||| ||||| |||||||| | | Sbjct 1959075 TCTTCCTAGACATCAGAAAGAACACCTGGGTACTCT---GGGAGTTTATATTTCTCCAAA 1959131 Query 4075 TCAAATTCTGG 4085 |||| |||||| Sbjct 1959132 TCAATTTCTGG 1959142 >seq6 Length=37047529 Score = 116 bits (128), Expect = 3e-21 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| | |||||||| | |||||| ||| | ||||||||||| ||||||| || Sbjct 26345685 CTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGACTCTTCTCGGG 26345744 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| ||||||||||||| |||||||||||| || Sbjct 26345745 AATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 26345793 Score = 109 bits (120), Expect = 4e-19 Identities = 109/140 (78%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 4145 ATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTA 4204 || ||||||| || | | ||||| || ||||| ||||| | |||||| ||||| || | Sbjct 26343050 ATAGATAACTT-TACTTACCTTATAAACGGAACTGCCTCCCACTATCCAAACCATATCCA 26343108 Query 4205 CTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTA 4264 ||||||||| ||||||||| | || |||||||||| |||||||| | ||| || || | Sbjct 26343109 CTTTATTTGTTAATTCTGGTTCCTCAATAAGTTTTAAGGCATCATCCAGACTTTTGGCGA 26343168 Query 4265 AAAAATGAGCTCTATGTGGA 4284 ||||||||||| | |||| Sbjct 26343169 GAAAATGAGCTCCTTTTGGA 26343188 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || |||| | |||||| ||||| |||||||||||||||||||| | ||| Sbjct 26338077 AAAACACCTTCACATTACTCATTCTTTTCATACACTTCAAATTTGTACTTAATGCCTTTT 26338136 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATA 4046 || || || |||| ||||||||||| ||| || Sbjct 26338137 TCCTCCTGGACATCAGAAAGAACACCTGGGTA 26338168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361221309737039