Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq67 230 3e-55 seq57 131 2e-25 seq48 107 2e-18 seq22 96.9 4e-15 seq54 89.7 6e-13 >seq67 Length=8586409 Score = 230 bits (254), Expect = 3e-55 Identities = 320/445 (72%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 ||||| |||| | || || || | ||||| | ||||| ||||| || || | |||| Sbjct 7039055 TGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCG 7039114 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 ||||| || ||||| || ||||| || || | || || ||||| ||||| | ||||| Sbjct 7039115 TTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAA 7039174 Query 24240 GATCCAGAAAAGAAAATTCCTTCTA-CTGCCGCAAAGGCAATAAGTCTTTCTCCATAACC 24298 || ||||||||||| |||||||| | |||| ||||| || | || ||||||||| | Sbjct 7039175 GAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGT 7039234 Query 24299 GGCG-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 24355 | | || ||| | ||||| | ||||| || |||||| | || |||||||||| Sbjct 7039235 GACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCAT 7039294 Query 24356 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 24415 ||||| | ||||| || ||| | | |||| || |||||||| || || ||||| Sbjct 7039295 GGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7039354 Query 24416 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA 24475 | |||||||||||||| ||||| |||| ||| |||| ||||| || | |||||| || Sbjct 7039355 GAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCA 7039414 Query 24476 TCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTAT 24535 | || ||| | ||||| |||||| | || || || | || |||||||| ||||| Sbjct 7039415 GCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTAT 7039474 Query 24536 TCCGTCACTGGCTGCAAAAAACGCC 24560 || || || |||||||| || ||| Sbjct 7039475 GCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq57 Length=10025392 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 65920 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 65979 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 65980 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAA 66039 Query 53270 CTATTTCTAAGACCGTA 53286 || ||||| | ||| || Sbjct 66040 CTGTTTCTTATACCATA 66056 Score = 96.9 bits (106), Expect = 4e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 80776 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 80835 Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 80836 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 80895 Query 54145 CGGTTCCAAGTATATGGTCATAACTCCAGGCCG 54177 || |||| ||| || | | ||||||| || Sbjct 80896 AGGCTCCAGGTAAATAGCAAATGCTCCAGGTCG 80928 Score = 96.9 bits (106), Expect = 4e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| |||| ||| |||||||||||||| | || || || || || || || || |||| Sbjct 95336 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 95395 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||||| || || || | ||||| | || || ||| |||| || | || ||| || | Sbjct 95396 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 95455 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||| || || || || ||| | |||| || ||||| || ||||| Sbjct 95456 GTTCCACAGTAGTGACCCCACTGTATAAACCCTGGATTACTTTCAT 95501 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 53390 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 53449 || || || ||||| || | || || || || ||||| || || || || || || ||| Sbjct 76509 TAGGTTTCATATGGGCCATGCTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATAA 76568 Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 53509 ||||||||||| ||||| | |||||| | || || || | || ||||| ||||| Sbjct 76569 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 76628 Query 53510 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 53569 | | |||||||| || ||||| | ||||| || || || || ||||| | ||| | Sbjct 76629 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATAGGGCGATGACGT 76688 Query 53570 TTATTAGA 53577 ||||| || Sbjct 76689 TTATTTGA 76696 >seq48 Length=11824846 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218 || ||||| || || | ||| |||||||| |||||||| ||||| || || | || || Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 24277 | ||| ||||| | ||||||||||| || ||||||||||||||||| || |||||||| Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3086636 >seq22 Length=20942318 Score = 96.9 bits (106), Expect = 4e-15 Identities = 146/207 (71%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 21931 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 21990 ||| ||||| | | |||||||||| | || ||| ||| || ||| | || |||| || Sbjct 6678781 TTGAACTTCCTCTATTTCTGGATAAAAAATCTGTTCATAAATGAGCAGTGCAATTCGGTC 6678722 Query 21991 CCCCGTATTTACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCCTATATTTCC 22050 ||| | ||||| | |||| | | ||| ||| ||||| || | || || | |||||| Sbjct 6678721 TCCCTTTTTTACTTCAAATTTTTCTTTGCCAAAATTAAACAGTACAACACCAAGATTTCC 6678662 Query 22051 CCTATAATCTTCGTCTATTACACCGCCTCCTATATC---AATGCCTTTTAGGGACAGACC 22107 ||||||||||| ||||| ||||| |||||| ||| || | || | | | ||| Sbjct 6678661 TCTATAATCTTCATCTATAACACCAGCTCCTACATCTATAAAGTGTTCTGCAGCCCAACC 6678602 Query 22108 AGACCTAGGAGCTATTCTACCATAGCA 22134 || | ||||||| ||| |||||||| Sbjct 6678601 GGAACGTGGAGCTACTCTTCCATAGCA 6678575 >seq54 Length=10138281 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 21946 TTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCCCCCGTATTTACATT 22005 |||||||||| | || |||| | | || ||||| || ||| || ||| | ||||| | Sbjct 890071 TTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTTGGTCACCCTTTTTTACTTC 890130 Query 22006 AAATGTATATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTATAATCTTCGTC 22065 |||| | | ||| ||| ||||| || | || || | |||||| ||||||||||| || Sbjct 890131 AAATTTTTTTTTGCCAAAATTAAACAGTACAACACCAAGATTTCCTCTATAATCTTCATC 890190 Query 22066 TATTACACCGCCTCCTATATCAAT 22089 ||| ||||| |||||| ||| || Sbjct 890191 TATAACACCAGCTCCTACATCTAT 890214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593671215300720