Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq186 138 1e-27 seq4 120 3e-22 seq65 98.7 8e-16 >seq186 Length=2028101 Score = 138 bits (152), Expect = 1e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 20957 CAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTG 21016 ||| | ||| |||| |||| |||||||| || || ||||| ||||| | || || | Sbjct 786272 CAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACG 786213 Query 21017 GGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTC 21076 | | || |||||||| ||||| ||| | || || ||||||||||| || | |||||| Sbjct 786212 GCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTC 786153 Query 21077 CTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGT 21136 ||| || |||||| |||||| | | | ||||||| ||||||| | |||| ||| Sbjct 786152 CTTATCCTGGATCTTGGCTTTCACATTCTCAATGGTATCACTGGGCTCCATCTCCAGGGT 786093 Query 21137 AATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||||||||||| || | || || || || ||||||||||||| Sbjct 786092 GATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCATTTTGA 786049 >seq4 Length=40935223 Score = 120 bits (132), Expect = 3e-22 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| |||| |||||||| || || |||| ||||| | Sbjct 7265302 CCCCTC--AGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTCGTAGTC----A 7265355 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 | || ||| | || |||||||| ||||| ||| | || || ||||||||||| || | Sbjct 7265356 GAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGA 7265415 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 ||||||||| || |||||| ||||| | | | ||||||| | |||| | | Sbjct 7265416 TGCCTTCCTTATCTTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGTGCTCAGCCT 7265475 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||| || |||||||||||||| | || || || || ||||||||||||| Sbjct 7265476 CCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTGA 7265526 >seq65 Length=8612916 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| ||||| | | |||||| |||| |||||||| || ||||| || ||||| | Sbjct 6272667 CCCCCACGCAGACGGGGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAG 6272608 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||||||||| ||| |||| || | ||||||||| || Sbjct 6272607 AGCGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGG 6272548 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCAC-CTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||| ||| ||| ||| || ||| || || | | || |||| ||| || Sbjct 6272547 ATGCCCTCCCGGTCTTGGATTTTAGTTTTGACACTCTCAG-TGGTGTCACTGGGTTCGAC 6272489 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| || | || || || || || ||||| Sbjct 6272488 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 6272441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422224261877924