Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 2e-11 seq7 84.2 2e-11 seq19 82.4 6e-11 >seq14 Length=29593583 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||| ||||| | || ||||| |||||||| |||||||| ||||| ||| ||||| Sbjct 11200356 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 11200297 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 || | ||| || | || ||||| ||||||||||| || |||||||| | ||||| Sbjct 11200296 AATGGGCATACTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 11200238 >seq7 Length=35612534 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||||||||| || ||||| |||||||| |||||| | ||||| ||||||||| Sbjct 30012222 GATAAAGAAGGAACTCCTCCTGATCAGCAAAGACTGATCTTTACTGGCAAGCAATTGGAA 30012163 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 || | ||| || | || ||||| ||||||||||| || |||||||| | ||||| Sbjct 30012162 AATAGACATACTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 30012104 >seq19 Length=23049436 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || ||||| || ||| | ||||| | ||||| || ||||| || ||| |||||| Sbjct 10825318 AAGATGCAGATTTTCTTGAAAACTCTCACGGGGAAGACCATCACTCTCGAGGTTGAACCC 10825259 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | || | ||| || || ||||| ||||| | || ||| Sbjct 10825258 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 10825199 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || |||||||| |||||||| | ||| ||| |||||||| | ||| || | || ||| Sbjct 10825198 CAGCAAAGACTAATCTTTGCTGTCAAGCAACTGGAAGATGGACACACTTTGTCTGACTAC 10825139 Query 25212 AATATTCAAAAGGAATCTACTCTTC 25236 | ||||||||||| || ||||||| Sbjct 10825138 AGCATTCAAAAGGAGTCCACTCTTC 10825114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410762810287646