Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq67 163 3e-35 seq7 132 5e-26 seq65 118 1e-21 seq186 111 2e-19 seq23 107 2e-18 seq126 105 7e-18 seq4 105 7e-18 seq228 104 2e-17 seq109 87.8 2e-12 seq68 87.8 2e-12 seq13 87.8 2e-12 >seq67 Length=8586409 Score = 163 bits (180), Expect = 3e-35 Identities = 306/446 (69%), Gaps = 3/446 (1%) Strand=Plus/Minus Query 116761 GGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT-TTCGCTC 116819 ||| || || || || ||||| ||||| || || || || |||| ||||| || || | Sbjct 7039499 GGCTTTCTTTGCAGCAAGCGATGGCATAGTAAATGAAAACTTGGTGGAGCGCGTTAGC-C 7039441 Query 116820 AGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACG 116879 | || || ||| | ||| || || || |||||| |||| || || ||||||| || Sbjct 7039440 AAGAAGTTCAGATCATCGAAGCCCGCTGATTCTACAGCTTCCAAATTACCATGGAACACA 7039381 Query 116880 TGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGC 116939 | || || ||||||||| |||||| ||||| ||| | ||| |||| | | Sbjct 7039380 TACATTCTGAAATGTATAGTCTCCTCATTGACACTTACATTAAAGATTCCAAGGAAAGGG 7039321 Query 116940 TCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGC 116999 | | || || |||| ||||| ||||| || | ||| |||||| || ||||| Sbjct 7039320 ATTTTCTTTTCAATGCCACTGAGACCATGCCTTGTGCCAAGAGGAAGGCAGACTGGGCCT 7039261 Query 117000 TGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCG 117059 ||| ||||||| | | ||||| | ||| || || | | ||||| || || || | Sbjct 7039260 TGCATTGGATCGAGGACCAAGAGGTCACCTGTGGAGAAAGTGTTGTGGCTTTTGCCGCAG 7039201 Query 117060 TCG-AGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGC 117118 | | | || |||||||||| || ||| || ||||| |||||||||||| | || Sbjct 7039200 TTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATTGATATTCTGGCTCAAGAAATGAGGA 7039141 Query 117119 CTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGC 117178 || ||||| ||||| || ||| |||||| || ||| ||| || ||||| |||| || Sbjct 7039140 CTGATGCCTGGCCTCACATTCTCCAACGAACTTATCAGCAGAGATAAGGGTTTGCACTGT 7039081 Query 117179 GACTTTGCCTGTTTGCTGTTCAAGCA 117204 |||||||||| | ||||||| || Sbjct 7039080 CACTTTGCCTGCCTAGTGTTCAAACA 7039055 >seq7 Length=35612534 Score = 132 bits (146), Expect = 5e-26 Identities = 97/113 (86%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||||| |||||||||||||| |||||| | |||||||| | |||| |||| Sbjct 33436744 GAGCCGCTGCTGCGGGAGAACCCCCGCCGCTTCGTGGTCTTCCCCATCGAGTACCAGGAC 33436685 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||| |||||||| ||||||||||| || |||||||| | ||||||||| Sbjct 33436684 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAGGT 33436632 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091 || |||||| | ||||| ||||| ||||| |||||| ||||||| || ||| ||||| Sbjct 33433281 GGAGAGCGCGTCGTGGCGTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCG 33433222 Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151 |||| || ||||||||||| || ||||| ||||| ||||| || ||| |||||||||| Sbjct 33433221 TCCATCTTCTGGCTCAAGAAGCGAGGCCTGATGCCGGGCCTCACGTTCTCCAACGAGCTC 33433162 Query 117152 ATCTCCAGGGACGAGG 117167 || ||| || |||| Sbjct 33433161 ATTAGCAGAGATGAGG 33433146 Score = 105 bits (116), Expect = 7e-18 Identities = 98/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 116685 AGGTGGACCTGTCCAAGGACACG-AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCAT 116743 |||||||||| ||||||||| | ||| |||||||| | |||| | | | ||||| | Sbjct 33436395 AGGTGGACCTCTCCAAGGACCTGCAGC-ACTGGGAGGCCCTGAAGGCCGAGGAGCGGTAC 33436337 Query 116744 TTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTG 116803 |||||| ||||| |||||||| ||||| || ||||||||||||||||| ||||| ||| Sbjct 33436336 TTCATCTCCCACGTCCTGGCCTTCTTCGCGGCGAGCGACGGCATCGTCAATGAGAACCTG 33436277 Query 116804 GT 116805 || Sbjct 33436276 GT 33436275 Score = 102 bits (112), Expect = 8e-17 Identities = 96/118 (81%), Gaps = 6/118 (5%) Strand=Plus/Minus Query 116803 GGTCGAGCG-TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTC 116861 ||| ||||| ||| || ||||| || ||| | | ||||| ||||||||||||||||| | Sbjct 33435855 GGTGGAGCGGTTTAGC-CAGGAAGTTCAGATCACAGAGGCCCGGTGCTTCTACGGCTTCC 33435797 Query 116862 AGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACC--CTCATCGACACGTAC 116917 ||||||||||||||||| | |||||||| ||||| | || ||||||||||| ||| Sbjct 33435796 AGATCGCCATGGAGAACATCCACTCGGAGATGTA--CAGCCTGCTCATCGACACCTAC 33435741 Score = 93.3 bits (102), Expect = 4e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007 || |||||||||||||||||||| |||||||| ||||||| || ||||| ||||||||| Sbjct 33433753 TTCAACGCCATCGAGACGATGCCCTGCGTCAAGAAGAAGGCGGACTGGGCCCTGCGCTGG 33433694 Query 117008 ATCGCCGGCAGAGAGGCCGCCTTCGG 117033 |||| | || |||||| ||| ||| Sbjct 33433693 ATCGGGGACAAGGAGGCCACCTACGG 33433668 >seq65 Length=8612916 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| |||||| ||| Sbjct 6272441 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCAGT 6272500 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| ||||| | ||| ||||||||||| | |||||| Sbjct 6272501 GACACCACTGAGAGTGTCAAAACTAAAATCCAAGACCGGGAGGGCATCCCGCCTGACCAG 6272560 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | || |||||||||||||| || | ||||| ||| |||||||| Sbjct 6272561 CAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACTACAAT 6272620 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||| ||| |||| ||||| Sbjct 6272621 ATTCAGAAAGAGTCCACCCTGCA 6272643 >seq186 Length=2028101 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| || || || || ||||| ||||||||| | || | || || Sbjct 786051 AAAATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGATGGAGCCC 786110 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | | | | | || | || || | || || || |||||||| | ||| Sbjct 786111 AGTGATACCATTGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGCATCCCTCCTGAC 786170 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| |||||||| || | || || || |||||| Sbjct 786171 CAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCTGACTAC 786230 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| ||| |||| ||||| || || | || ||| ||| ||| Sbjct 786231 AACATCCAGAAAGAGTCCACCCTGCACCTGGTCCTCCGTCTGAAGGGTGGC 786281 >seq23 Length=20579130 Score = 107 bits (118), Expect = 2e-18 Identities = 239/353 (68%), Gaps = 12/353 (3%) Strand=Plus/Minus Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007 || || ||| | ||||||||||| || | ||| |||||| | ||||| ||| ||| Sbjct 7834742 TTCAATGCCGTGGAGACGATGCCTTGTGCCAA---GAAGGCAGCCTGGGCCTGGCGATGG 7834686 Query 117008 ATCGCCGGCAGA--GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGG 117065 || | |||| | |||||||||| || || || | || || || || || || || | Sbjct 7834685 ATGG--GGCACAATGAGGCCGCCTGTGGAGAACGTGTTGTAGCGTTTGCCGCAGTGGAAG 7834628 Query 117066 GCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125 | ||||||||| | ||| || | ||||| |||||||||||| | | ||| ||| Sbjct 7834627 GAATCTTCTTTTATGTTCTTTT-GCGTCAATATTCTGGCTCAAGAAATGAGACCTGGTGC 7834569 Query 117126 CCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTG 117185 | ||||| | | || |||| | || | ||| | |||||| |||| || ||||||| Sbjct 7834568 CTGGCCTCATTCTC--CAACCAACTGAGGAGCAGAGGTGAGGGTTTGCACTGAGACTTTG 7834511 Query 117186 CCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCG 117245 |||| || ||||||| || || |||| ||| | | | | || | |||| Sbjct 7834510 CCTGCCTGATGTTCAAACACCTGCTGCACAAACCTTCAGAGCAGAGGGTGAAAGAGA--A 7834453 Query 117246 TCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTG 117298 ||||| |||| || || |||||| |||||||| || || |||| ||| Sbjct 7834452 TCACCAACGCAGTGAGGATAGAGCAGGAGTTCCTCACAGAGGCCTTGCCAGTG 7834400 >seq126 Length=3816233 Score = 105 bits (116), Expect = 7e-18 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 40720 AAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATT 40779 || ||||||||| || | || || ||| |||| | | | | |||||| || ||| Sbjct 216069 AAGACCATCACCCTCAAGGTTGAGCCCAGTGACACCATCAAGAATGTCAAGGTCAAGATT 216128 Query 40780 CTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTG 40839 | |||||||| ||||||||| | |||||| | | || |||| || || ||||| ||| Sbjct 216129 CAAGACAAAGAAGGCATCCCCCCTGACCAGAAGAGGCTGATCTTTGCCGGTAAACAACTG 216188 Query 40840 GACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || || | || | | || |||||||||||| ||||| ||| |||| ||||| || || Sbjct 216189 GAAGATGGGCTCCCTGTC--CGACTACAACATTCAGAAAGAGTCCACTCTGCACCTGGTC 216246 Query 40900 TTGCGCTTGAGGGGCGG 40916 ||||||| || || || Sbjct 216247 CTGCGCTTAAGAGGAGG 216263 >seq4 Length=40935223 Score = 105 bits (116), Expect = 7e-18 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| || || || || ||||| |||||||| | || | || | Sbjct 7265524 AAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGCTGAGCAC 7265465 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | | | | | |||| || || | || || || |||||||| | ||| Sbjct 7265464 AGTGATACCATTGAGAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATCCCTCCCGAC 7265405 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| |||||||| || | || ||| ||| |||||| Sbjct 7265404 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATG-GC-CACACTC--TGACTAC 7265349 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||| ||| |||| ||||| || || | || ||||||| ||| Sbjct 7265348 GACATCCAGAAAGAGTCCACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 7265298 >seq228 Length=1351672 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 40688 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA 40747 ||||||| || || || || || || || ||||| || |||||| | || || || ||| Sbjct 29384 AAATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACCCTTGAGGTTGAGCCCA 29325 Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | | |||| | ||||| | ||||| |||||||||| | |||| Sbjct 29324 GTGACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTGTCTGACC 29265 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || || | || |||||||||| || || | ||||| ||| ||||||| Sbjct 29264 AGCAGCGTCTGATTTTTGCCAGCAAACAGCTTGAGGATGGTCGCACTCTCTCAGACTACA 29205 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 |||| ||||| || |||| ||||| Sbjct 29204 ACATTCAGAAAGAATCCACCCTGCA 29180 >seq109 Length=4293992 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | || || || || || || ||||| ||||||||| |||| || || ||| Sbjct 3359780 ATGCAGAACTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGACCAGT 3359839 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | ||||| | ||||| ||||||||||| | |||||| Sbjct 3359840 GACACCACGGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 3359899 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 | | || || | |||||||||| |||| || || |||| ||||| ||||||| Sbjct 3359900 TAGTGTCTGATTCTTGTGGGCAAACAGTTGGAGGATGACTGCACTCTCAA--ACTACAA- 3359956 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||| ||| |||| ||||| Sbjct 3359957 ---TAGAAAGAGTCCACCCTGCA 3359976 >seq68 Length=7962601 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || | Sbjct 2654385 ATGCATATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCTTAGT 2654444 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| | ||||| ||||| ||||||||||| | |||||| Sbjct 2654445 GATACCATTGAGAATGTCAATGCTAAAATCTAAGACAAGGAGGGCATCCCGCCTGACCAG 2654504 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 | | || || | ||||||||||||| || || | ||||| ||| | | |||| Sbjct 2654505 TACCATCTGATTTTTTCGGGCAAACAGCTAGAGGATGGCCGCACTCTCTCAGGCCACAAT 2654564 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || ||||| ||| |||| ||||| |||| | || ||||||| ||| Sbjct 2654565 ATTCAGAAAGAGTCCACACTGCACTCAGTGCTTCGTCTGAGGGGTGGC 2654612 >seq13 Length=31322082 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40704 AAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAAC 40763 ||| || || || ||||| ||||||| | | || || || || ||| | | | | Sbjct 6776611 AAAGACTCTGACTGGCAAGACCATCAACCTTGAGGTTGAGCACAGTAACAACATTGAGAA 6776552 Query 40764 GCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTA 40823 |||| | ||||| | ||||| |||||||||| | || ||||| | || |||| Sbjct 6776551 TGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTACCTGAACAGCAGCATCTGATCTC 6776492 Query 40824 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGC 40883 | |||||||||||| || || | ||||| |||| ||||||||||| ||||| | | | Sbjct 6776491 TGTGGGCAAACAGCTAGAGGATGGCCGCACTCTCACAGACTACAACATTCAGAAAGTGTC 6776432 Query 40884 CACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| | ||| | ||| | | ||||||| || Sbjct 6776431 CACCCGGCACTTGGTGCTTCATCTGAGGGGTGG 6776399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515175477210640