Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq228 122 8e-23 seq13 102 7e-17 seq126 91.5 1e-13 seq68 86.0 5e-12 seq109 84.2 2e-11 seq4 84.2 2e-11 seq40 82.4 7e-11 >seq228 Length=1351672 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || || ||||| ||||||||||| || | |||||| |||||| Sbjct 29173 CACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTC 29232 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| | || | || ||||||||||| || | | ||||||||||||||| Sbjct 29233 AAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTG 29292 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | || | |||||| || ||| ||||| | ||| | || || Sbjct 29293 GATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTT 29352 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| || || ||||| |||||||| Sbjct 29353 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 29382 >seq13 Length=31322082 Score = 102 bits (112), Expect = 7e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| || ||| |||| ||||||||||| || | | |||||| |||||| Sbjct 6776416 CACCAAGTGCCGGGTGGACACTTTCTGAATGTTGTAGTCTGTGAGAGTGCGGCCATCCTC 6776475 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| || | |||| ||| ||||||| || || | ||||||||||||||| Sbjct 6776476 TAGCTGTTTGCCCACAGAGATCAGATGCTGCTGTTCAGGTAGGATGCCCTCCTTGTCTTG 6776535 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | || | | ||| || ||| ||||| | | | | || || Sbjct 6776536 GATTTTAGCTTTGACATTCTCAATGTTGTTACTGTGCTCAACCTCAAGGTTGATGGTCTT 6776595 Query 118709 GCCGGTCAGAGTTTTT 118724 ||| |||||||| ||| Sbjct 6776596 GCCAGTCAGAGTCTTT 6776611 >seq126 Length=3816233 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| | ||| | || |||| ||| | || |||||||| ||||||||||| ||| Sbjct 216264 ACCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCG-- 216207 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | || | || ||| || || ||||| || || |||| || | || ||| || || || Sbjct 216206 GACAGGGAGCCCATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTGGTCAGGGGG 216147 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 ||||| || |||||| ||| || || || | | || |||||| || ||| || Sbjct 216146 GATGCCTTCTTTGTCTTGAATCTTGACCTTGACATTCTTGATGGTGTCACTGGGCTCAAC 216087 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCT 118734 || || ||| | || || | |||| ||| || ||||| |||| Sbjct 216086 CTTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGATCT 216043 >seq68 Length=7962601 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118534 AGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCT 118593 |||| | ||| |||||||| ||||| |||| | | |||||| |||||| |||| Sbjct 2654589 AGTGCAGTGTGGACTCTTTCTGAATATTGTGGCCTGAGAGAGTGCGGCCATCCTCTAGCT 2654530 Query 118594 GTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTT 118653 |||| || | | || ||| | | ||| || || || ||||||||||||||| |||| Sbjct 2654529 GTTTGCCCGAAAAAATCAGATGGTACTGGTCAGGCGGGATGCCCTCCTTGTCTTAGATTT 2654470 Query 118654 TTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGG 118713 | || || | || | ||| || | ||| ||||| | ||| | || ||||| | Sbjct 2654469 TAGCATTGACATTCTCAATGGTATCACTAAGCTCAACCTCAAGGGTGATGGTCTTGCCAG 2654410 Query 118714 TCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || ||||| || ||||| Sbjct 2654409 TCAGGGTCTTCACAAAGATATGCAT 2654385 >seq109 Length=4293992 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 |||||| | |||||| || | || |||| || ||| || || || ||||||||||| Sbjct 3359935 ATCCTCCAACTGTTTGCCCACAAGAATCAGACACTACTGGTCAGGCGGGATGCCCTCCTT 3359876 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 |||| ||||| ||| || | || |||||| || |||| ||||||| ||| | Sbjct 3359875 GTCTTGGATTTTAGCTTTGACATTCTCCGTGGTGTCACTGGTCTCAACCTCGAGGGTGAT 3359816 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| ||||| || || ||||| ||||||| Sbjct 3359815 GGTCTTGCCAGTCAGGGTCTTCACAAAGTTCTGCAT 3359780 >seq4 Length=40935223 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || |||||||| || |||| ||| || | |||| | ||| || Sbjct 7265317 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTCGTAGTC----AGAGTGTGGCCATCTTCC 7265372 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || ||||||| | |||||| |||||||| ||||| ||||| ||| Sbjct 7265373 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCTTGG 7265432 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||| || || ||| |||| | || | || ||| Sbjct 7265433 ATCTTGGCCTTCACATTCTCAATGGTATCACTGTGCTCAGCCTCCAGAGTGATGGTCTTG 7265492 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || || || ||||| Sbjct 7265493 CCGGTCAGGGTCTTCACGAAGATTTGCAT 7265521 >seq40 Length=13002427 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/208 (70%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 ||||||| | || ||||||| ||||| ||||| || | | ||||| |||||| | Sbjct 3990695 CCAAGTGCAGGGTGGACTCTTGCTGAATATTGTAGTC--TGAATGTGCGTCCATCCTCCA 3990752 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || || | | | ||||||||||| || || | ||||||||| ||||| | Sbjct 3990753 GCTGCTTGCCCACAAAAACCAGACGCTGCTGGTCAGGCAGGATGCCCTCCCTGTCTTGGA 3990812 Query 118651 TTTTTTGTTTAAC-CTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 |||| ||| | |||| | || ||| || |||| ||||| | || || | ||| Sbjct 3990813 TTTTAGCTTTGGCATTGTTAG-TGGAGTCACTGGTCTCAACCTCCAAGGCCATGATCTTG 3990871 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCA 118737 || ||||| || |||||||| | ||||| Sbjct 3990872 CCAGTCAG-GTCTTTACAAAGAGCTGCA 3990898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433794504465988