Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq65 109 6e-19 seq228 104 3e-17 seq186 104 3e-17 seq91 102 9e-17 seq161 98.7 1e-15 seq85 98.7 1e-15 seq28 98.7 1e-15 >seq65 Length=8612916 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| ||| ||| || ||||||||||| || | || || || | || || Sbjct 6272650 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTC 6272591 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||| || || || || || || ||||||||||| | ||| | || |||| ||| Sbjct 6272590 CAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 6272531 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 |||||| ||||| || | ||||| || | ||| || |||| |||||||| || Sbjct 6272530 GATTTTAGTTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTT 6272471 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || ||||| || ||||| ||||| Sbjct 6272470 GCCAGTCAGGGTCTTCACGAAGATCTGCAT 6272441 >seq228 Length=1351672 Score = 104 bits (114), Expect = 3e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| ||| || || ||||| ||||| || | ||||| || | || || Sbjct 29173 CACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTC 29232 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||| || | || || || || ||||||||||| | | | | || ||||||||| Sbjct 29233 AAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTG 29292 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 |||||| ||||| || | | ||||| || | || || || | ||||| || || Sbjct 29293 GATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTT 29352 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATTT 43185 ||| || || ||||| |||||||| ||||||| Sbjct 29353 GCCAGTCAGGGTCTTCACAAAGATCTGCATTT 29384 >seq186 Length=2028101 Score = 104 bits (114), Expect = 3e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| |||| ||| ||| || || || ||||| |||| ||||| || | || || Sbjct 786262 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCTTCC 786203 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| ||||| || ||||| | ||||||||| | || | || ||||| ||| | Sbjct 786202 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGG 786143 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || ||| | || | | || || || | |||| || | |||||||| ||| Sbjct 786142 ATCTTGGCTTTCACATTCTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGGTCTTG 786083 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189 || || || ||||| || |||||||||||||| || Sbjct 786082 CCAGTCAGGGTCTTCACGAAGATTTGCATTTTGAC 786048 >seq91 Length=5537469 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 4091666 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 4091607 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 4091606 TATACTAACGAGGA 4091593 >seq161 Length=2648914 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1353351 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1353410 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1353411 TACTAACGAGGA 1353422 >seq85 Length=5852886 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 375616 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 375557 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 375556 TACTAACGAGGA 375545 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 416210 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 416151 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 416150 TACTAACGAGGA 416139 >seq28 Length=17803559 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 15033785 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 15033844 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 15033845 TACTAACGAGGA 15033856 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 13119388 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 13119447 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 13119448 ATACTAACGAGGA 13119460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571769074128920