Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq186 98.7 6e-16 seq228 93.3 3e-14 seq4 89.7 3e-13 >seq186 Length=2028101 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | || |||||||| ||||||||||| || || |||| | || Sbjct 786265 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCT 786206 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||||||||| || || ||||||| ||||||||| || | || ||||| || Sbjct 786205 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCC 786146 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| || ||||| | || | || | ||| | | || | |||| |||||||| Sbjct 786145 TGGATC-TTGGCTTTCACATTCTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGGT 786087 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || ||||| ||||| ||||| Sbjct 786086 CTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 786054 >seq228 Length=1351672 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | || ||||||||| ||||||||||| || || || | || Sbjct 29171 AGCACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCC 29230 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296 || | ||| |||| || ||||| || ||||||||||| ||| || | || ||||||||| Sbjct 29231 TCAAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGG-ATGCCCTCCTTGTC 29289 Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 || ||| ||||| | || | || | || | | || || || | ||||| | Sbjct 29290 TTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAG 29348 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | ||||| || || || ||||||||||||||||| Sbjct 29349 TCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 29382 >seq4 Length=40935223 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | || |||||||| |||| |||||| || | || | || Sbjct 7265314 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTCGTAGTCAGAGTGT----GGCCATCT 7265369 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||||||||| || ||||||| |||||||||| || | || ||||| || Sbjct 7265370 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCT 7265429 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | ||| | || | |||| |||||||| Sbjct 7265430 TGGATCTTGGCCTTCACATTCTCAATGGTATCACTGTGCTCAGCCTCCAGAGTGATGGTC 7265489 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || || ||||| ||||| ||||| Sbjct 7265490 TTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 7265521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323045268719840