Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq228 107 2e-18 seq126 98.7 8e-16 seq4 93.3 3e-14 >seq228 Length=1351672 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| || ||||||||||||||||| || |||| | || || Sbjct 29174 ACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTCA 29233 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| | ||| || |||| ||||| ||||| | | | ||||||||||| Sbjct 29234 AGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTGG 29293 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | | |||| | ||| ||||| | ||| || |||||| Sbjct 29294 ATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTTG 29353 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||||||||| ||||| Sbjct 29354 CCAGTCAGGGTCTTCACAAAGATCTGCAT 29382 >seq126 Length=3816233 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||| || | | |||| |||||| ||| ||| |||||||||||||||||| | Sbjct 216263 CCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAC 216204 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | | || ||||||||||| ||||| || |||| || || ||||| || || Sbjct 216203 AG--GGAGCCCATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTGGTCAGGGGGG 216146 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || ||||| ||| || ||| || | | | |||| | ||| ||| Sbjct 216145 ATGCCTTCTTTGTCTTGAATCTTGACCTTGACATTCTTGATGGTGTCACTGGGCTCAACC 216086 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGAT 45330 | | ||| || ||||| | |||| ||||||||||||||| Sbjct 216085 TTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGAT 216045 >seq4 Length=40935223 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| |||||| ||| ||| ||||| |||| |||||| Sbjct 7265298 GCCACCCCTCAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTCGTAGTCAG- 7265356 Query 45169 CAGT-TGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 ||| |||| ||| || ||| || || || || || || | || ||| |||||||||| Sbjct 7265357 -AGTGTGGCCATCTTC---CAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAG 7265412 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | || ||||| || || || ||| || | | | | | || | ||| Sbjct 7265413 GGATGCCTTCCTTATCTTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGTGCTCAG 7265472 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 |||||| || || |||||||| ||||| |||||||| ||||||||||| ||| Sbjct 7265473 CCTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTG 7265525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395042511107569