Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq57 98.7 9e-16 seq228 91.5 1e-13 seq65 86.0 6e-12 seq7 86.0 6e-12 >seq57 Length=10025392 Score = 98.7 bits (108), Expect = 9e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| |||||| || || ||||| ||||| || || || ||||| || || || || Sbjct 79437 ACCTCATCTTTGCTGGTATATTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTT 79496 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 |||| || || ||||| || ||||| || ||||| |||||||||||||| || || Sbjct 79497 CCCAGGTTCTGTTGATTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGGGTA 79556 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196 || ||||| ||| ||||| || ||||| Sbjct 79557 CCTGTCTCTGTCTGAGACTCAATAATCGC 79585 >seq228 Length=1351672 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| | || ||||| || Sbjct 29382 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACCCTTGAGGTTGAGCCCAGT 29323 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| |||||||| ||| | | | | |||||| Sbjct 29322 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTGTCTGACCAG 29263 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || |||||||| | || || | ||| | || || ||| Sbjct 29262 CAGCGTCTGATTTTTGCCAGCAAACAGCTTGAGGATGGTCGCACTCTCTCAGACTACAAC 29203 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| |||||||| || || || |||| ||| Sbjct 29202 ATTCAGAAAGAATCCACCCTGCACTTGGTGCTT 29170 >seq65 Length=8612916 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| ||||| || |||||| |||| || ||||| Sbjct 6272441 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCAGT 6272500 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || | |||||| | ||| ||| ||| ||| | ||||| |||||| Sbjct 6272501 GACACCACTGAGAGTGTCAAAACTAAAATCCAAGACCGGGAGGGCATCCCGCCTGACCAG 6272560 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| || || || || ||||||||| |||| || Sbjct 6272561 CAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGGA 6272595 >seq7 Length=35612534 Score = 86.0 bits (94), Expect = 6e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 |||||||||||||| || || || ||||| || ||| ||| ||| | || || ||| | Sbjct 33433266 GCGTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATCTTCTGGCTC 33433207 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082 ||||| || ||||||||||| ||||| ||||| ||||||| Sbjct 33433206 AAGAAGCGAGGCCTGATGCCGGGCCTCACGTTCTCCAACGAG 33433165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445728571148880